Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g00899 ATGGGAATTAGTTTATTGGAGTGGTGTAATAATAATAATAGAGCTAATTCAGAAGAAGAATGGCACATGAGATCAAGTAATTTAAGAAGAAGTGTAGTAGTAGTGTTGGTGTTGGGAGTGATAACAATAGTTACATGTTGGATAATTATTGTTCATAGATGGAACGAAAGGAAGAAGATGAGGAGGGGTCCAAAAACATGGCCAATCGTAGGAGCAGCAATAGAACAGTTTGTAAATTACCACAGAATGCATGATTGGATTTTGGGTTATCTTAATCTCTACAAAACTGTTGTGGTTCCCATGCCTTTCACTACTTATACTTATATTGCCGACCCTGCCAATGTTCAACATATTCTCAAGACCAACTTTGCTAATTATCCAAAGGGTGATGTATATCATTCGTACATGGAAGTGCTTCTTGGAGATGGGATCTTCAACGTAGATGGAGAGTTATGGAGGAAACAAAGGAAAACTGCTAGCTTCGAATTTGCATCTAAGAATTTGAGGGATTTCAGTACCTTAGTTTTTAGAGACTATAGTCTCAAGCTATCAACTATTTTAACACGTGCCTCTTTACTGAACCAACAACTTGACATGCAGGAATTGTTGACGAGGATGACTTTAGATTCCATATGCAAGGTTGGCTTTGGTGTTGAAATTGGATCATTGGCTCCCAATTTGCCAGAAAATAAGTTTGCTAAGGCCTTTGATACAGCCAATATGATCGTTACCCTTCGCTTCATTGATCCTTTATGGAAAATTAAAAGGTTTCTGAATCTGGGATCTGAAGCTCTTCTTGATAAATCCATCAAAATCATTGATGATTTCACTTATTCTGTCATTGCCACAAGGAAAAAAGAGATCCAAGAAGCTCAAACTACGCCCACAGAACCCAATAATAAGATAAAACATGACATATTGTCGAGATTTATTGAGTTAGGGGAAGACCCTAACAACAAATTCACAGACAAAAGCTTAAGAGACGTTGTTCTAAACTTCGTGATTGCCGGACGTGACACAACAGCCGCAACTCTTTCATGGAGTATTTATATGTTAATGACTCATTCAGATGTCTCCCAAAAACTTTACTCGGAGCTCAAAAGTTTTGAAGAAGAAAGAGCCAAAGAACATAGCATTTCATTGCTTCAATACCAACCAAATGATATTCAATCCTTTGAGAGAAGAGTTATACAATTTTCACAACTCCTCAATTATGATTCTCTTGCTCGATTACATTATTTGCATGCTATCATTACTGAGACACTTCGTCTTTACCCTGCAGTCCCCCAGGTCGGTGGCAAGCTTACAGATATCGCAATCAAACCTAAAGATCCAAAGGGAATTTTGGAGGATGATATATTGCCAGATGGGACAAAGGTAAGAGCTGGAGGAATGGTGACATATGTTCCTTATTCAATGGGAAGAATGGAATACAATTGGGGTCCTGATGCAACTTCTTTTAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAATGAATCTCCATTCAAGTTTACAGCTTTTCAGGCCGGACCAAGGATCTGCATGGGGAAAGACTCGGCATATCTACAAATGAAAATGACTCTTGCCATTTTATGCAGATTCTACAAATTTAGTTTGGTGAGTGGGCATAGAGTCAACTACAGAATGATGACTATTCTCTCAATGGCCAATGGATTGAAAGTTACTGTGGCTTCGCGCTCTTAA 1710 38.42 MGISLLEWCNNNNRANSEEEWHMRSSNLRRSVVVVLVLGVITIVTCWIIIVHRWNERKKMRRGPKTWPIVGAAIEQFVNYHRMHDWILGYLNLYKTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFRDYSLKLSTILTRASLLNQQLDMQELLTRMTLDSICKVGFGVEIGSLAPNLPENKFAKAFDTANMIVTLRFIDPLWKIKRFLNLGSEALLDKSIKIIDDFTYSVIATRKKEIQEAQTTPTEPNNKIKHDILSRFIELGEDPNNKFTDKSLRDVVLNFVIAGRDTTAATLSWSIYMLMTHSDVSQKLYSELKSFEEERAKEHSISLLQYQPNDIQSFERRVIQFSQLLNYDSLARLHYLHAIITETLRLYPAVPQVGGKLTDIAIKPKDPKGILEDDILPDGTKVRAGGMVTYVPYSMGRMEYNWGPDATSFNPERWLKQGIFHNESPFKFTAFQAGPRICMGKDSAYLQMKMTLAILCRFYKFSLVSGHRVNYRMMTILSMANGLKVTVASRS 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12129566 12132903 + MELO3C008532.2.1 Cme05g00899 327962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g00899 569 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 PRINTS E-class P450 group I signature 415 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 PRINTS E-class P450 group I signature 506 516 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 PRINTS E-class P450 group I signature 516 539 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 Gene3D Cytochrome P450 47 569 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 PANTHER CYTOCHROME P450 704B1 40 567 - -
Cme05g00899 569 SUPERFAMILY Cytochrome P450 63 568 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 PANTHER CYTOCHROME P450 40 567 - -
Cme05g00899 569 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 PRINTS P450 superfamily signature 507 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 PRINTS P450 superfamily signature 516 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme05g00899 569 Pfam Cytochrome P450 63 562 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00899 Cme-Chr5:12129566 Cme06g00237 Cme-Chr6:1406120 1.38E-133 dispersed
Cme05g00899 Cme-Chr5:12129566 Cme09g01772 Cme-Chr9:22177392 1.23E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g00899 K20495 - csv:101222076 1031.55