Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g01295 ATGGTGGTGAATTTCCAGTACACTGTTCTTGTGTTCTTGGCGATTCTTTTTGTTGGAAAGGCAGAAATTTACATTGTCACCATTGACGGAGAACCGATTGTAAGTTACAAAGGTGATCTTGATGGGTTTGAAGCTACAGCAATGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATCGTGACATCATATGCTCGTCACCTCGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGGTCCTTCAAGAAGCTCTATAGTTATAAACATCTCATCAATGGATTTGCTGTTGACATCACACACGAACAGGCAGAGTCTCTAAGACGCACACCAATCGTAAAATCTGTTGAGAGGGACTGGAAAGTTCGAAAACTGACAACGCACACACCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGTGGTGGCTTTGATAGAGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATTTATCCACATCATCCTAGTTTTGCAACATACAATACCGAACCTTTTGGGCCATGCATGAAGTATAAAGGGAAATGCGAAGTTGACCCCAACACTAAGAAGGATTTCTGCAATGGGAAGATCGTTGGAGCCCGACATTTTGCAGAAGCTGCTAAAGCTGCTGGGGCATTTAATCCAGATATTCATTTTGCATCTCCTTTGGATGGTGATGGACATGGAAGCCATACGGCAGCAATTGCAGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCTCCACGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGAATATTTGGAGGATTTGTTGCTGATGTTGTTGCAGCCATTGATCAGGCTGTACATGATGGGGTTGATATTCTCAGTCTTTCAGTGGGCCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCTGCCGTGAAGGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCGTATAGTCCATGGATAGCTACTGTGGCAGCTGCAATTGATGACAGAAGATACAAAAACCATCTGACACTTGGTAATGGCAAAATTTTGGCTGGACTTGGGCTATCACCTGCTACACATTTAAATCGAACATACACATTGGTCGCAGCTAATGATGTTCTGTTAGATTCTTCGGTGACGAAGTACAGCCCTTCAGACTGTCAAAAGCCTGAACTTCTAAACAAACACTTGGTTGAAGGAAAAGTACTTCTCTGTGGTTATTCATTCAGTTTTGTTGTTGGTACTGCTTCAATCAAAAAGGTCTCTCAAACAGCAAAAGCCCTTGGGGCGGCTGGCTTTGTTCTTGCTGTTGAAAACATTTCTCCAGGAGCAAAGTTTGACCCCGTTCCTGTTGGCATTCCTGGTATTCTTATAACTGATGTCAGCAAGTCAATGGATCTTATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCATTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCAAATATTAGAGATTTTAGCTTTCAGGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTCTCCAAATGGAACGGACGAACCAAACTATGTTGGAGAGGGATTTGCTATGATTTCTGGAACTAGCATGGCAGCGCCACATATAGCTGGCATAGCAGCTCTTGTTAAACAGAAGCATCCAAACTGGAGTCCTGCAGCCATCAAATCGGCTTTAATGACAACATCAACAACAATGGACAGAGGAGGAAGACCTCTTAAAGCACAACAATTTTCCGAAACAGAAGCCATGAAATTGGTAACTGCAACACCTTTCGATTATGGTAGTGGTCATGTAAACCCAAGAGCAGCATTGGATCCGGGACTCATATTTGATGCAGGTTATGAAGATTACTTGGGATTTTTGTGCACAACGGCGGGCATCAATGTTCACGAGATACACAACTATACTAACTCACCTTGCAACTTCACCATGGGACATCCCTGGAATCTCAACAGCCCATCAATTACCATCGCCCATCTCGTGGGAACTAAAATCGTTACTCGCACTGTAACAAATGTTGCCGAAGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAGTGAATCCTCCAGCAATGACTTTACGGTCTGGTTCATCAAGAAAATTTTCAGTAACTCTCACAGCTCGATCACTGACAGGAACATATAGTTTTGGCCAAGTTCTACTTAAGGGCAGTAGAGGACACAAGGTTAGAATACCTGTTGTAGCCATGGGATACCAACGATGA 2451 43.7 MVVNFQYTVLVFLAILFVGKAEIYIVTIDGEPIVSYKGDLDGFEATAMESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITHEQAESLRRTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCMKYKGKCEVDPNTKKDFCNGKIVGARHFAEAAKAAGAFNPDIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVTKYSPSDCQKPELLNKHLVEGKVLLCGYSFSFVVGTASIKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRGGRPLKAQQFSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLVGTKIVTRTVTNVAEEETYTITARMDPAVAIEVNPPAMTLRSGSSRKFSVTLTARSLTGTYSFGQVLLKGSRGHKVRIPVVAMGYQR 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21268432 21276081 + MELO3C003980.2.1 Cme05g01295 328358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g01295 816 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 815 IPR045051 -
Cme05g01295 816 SUPERFAMILY Protease propeptides/inhibitors 85 126 - -
Cme05g01295 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Cme05g01295 816 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Cme05g01295 816 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Cme05g01295 816 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Cme05g01295 816 PRINTS Subtilisin serine protease family (S8) signature 595 611 IPR015500 -
Cme05g01295 816 CDD PA_subtilisin_like 375 513 - -
Cme05g01295 816 Pfam Subtilase family 153 634 IPR000209 GO:0006508|GO:0008236
Cme05g01295 816 Gene3D - 368 533 - -
Cme05g01295 816 Pfam Peptidase inhibitor I9 24 126 IPR010259 -
Cme05g01295 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 596 606 IPR023828 -
Cme05g01295 816 Gene3D Peptidase S8/S53 domain 155 686 IPR036852 GO:0004252|GO:0006508
Cme05g01295 816 Gene3D - 690 813 - -
Cme05g01295 816 PANTHER CUCUMISIN-RELATED 14 815 - -
Cme05g01295 816 SUPERFAMILY Subtilisin-like 128 677 IPR036852 GO:0004252|GO:0006508
Cme05g01295 816 Pfam Fibronectin type-III domain 718 810 IPR041469 -
Cme05g01295 816 CDD Peptidases_S8_3 129 632 IPR034197 -
Cme05g01295 816 ProSiteProfiles Serine proteases, subtilase domain profile. 122 673 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g01629 Cme05g01295 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g01295 Cme-Chr5:21268432 Cme08g00050 Cme-Chr8:397288 0 dispersed
Cme05g01295 Cme-Chr5:21268432 Cme01g02803 Cme-Chr1:35044878 2.32E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g01295 - - csv:101219351 1608.96