Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme05g01344 | ATGTGGAATCCTCTGTCTTGGGTCATGGAAGCTGCAGCTATCATGGCCATTGCCTTGGCCAATGGTGGCGGTCGGGGACCGGATTGGCAGGATTTCGTCGGTATCGTCTGTCTTTTGGTTATCAACTCCACCATTAGTTTCATTGAAGAGAACAATGCTGGTAATGCAGCTGCTGCTCTTATGGCTGGTCTTGCACCTAAAACCAAGGTTCTGAGGGATGGAAAATGGTGTGAACAAGATGCATCAATTCTAGTACCAGGAGATGTGATCAGTGTGAAATTGGGAGATATCATCCCAGCAGATGCTCGTCTTCTCGAGGGTGATCCGTTAAAGGTTGATCAATCTGCCTTGACCGGAGAATCACTTCCCGTGACCAAGAACCCAGGGGATGAAGTTTTCTCTGGCTCCACTTGCAAACAAGGAGAAATCGAGGCTGTTGTTATTGCTACTGGTGTCCACACTTTCTTTGGTAAAGCAGCTCATCTTGTTGATAGTACTAATCAAGTTGGACACTTCCAAAAGGTTCTCACTGCCATTGGAAACTTTTGTATTTGCTCCATTGCCATTGGTATGTTGATTGAGATCCTCGTTATGTACCCGATCCAACACCGTGAATATAGAGATGGTATCGACAACCTTTTGGTTCTCTTGATTGGAGGCATTCCAATTGCTATGCCTACTGTCTTGTCAGTGACCATGGCTATTGGTTCTCACAAGCTGTCTCAACAAGGTGCTATCACCAAGAGAATGACAGCTATTGAAGAAATGGCCGGTATGGATGTACTTTGCAGTGACAAAACTGGAACGCTGACTCTTAACAAGTTGAGTGTTGACAAGAACTTGATTGAGGTGTTTGTCAAGGGTGTTGACAAAGAGCATGTCATTCTGCTTGCTGCAAGGGCATCTAGGACTGAAAACCAGGATGCAATTGATGCTGCCATGGTTGGAATGCTCGCTGACCCAAAAGAGGCAAGAGCTGGAATTAGAGAAATTCACTTCTTCCCATTTAATCCTGTGGATAAGAGAACTGCTTTGACTTACATTGATTCTAATGGAAACTGGCACCGTGCTAGCAAAGGTGCTCCTGAACAGATCTTGACTCTTTGCAACTGCAAAGAGGACTTCAAGAGGAAGGTGTTTTCTGTAATTGACAAGTTTGCCGAGCGTGGACTTCGATCTTTGGCTGTTGCAAGACAGGAAGTGCCTGAGAAGACCAAGGAAAGTCCCGGTGCTCCATGGCAATTTGTTGGTTTGTTGCCCCTTTTTGATCCTCCTAGACACGATAGTGCTGAAACCATCCGCAGGGCTCTCAACTTGGGTGTGAATGTCAAGATGATTACTGGTGATCAACTTGCTATAGCAAAGGAAACCGGTCGAAGACTTGGAATGGGAACGAACATGTATCCATCTTCTTCCTTACTCGGCCAGCACAAGGACGAAAGCATTGCTGGCCTTCCAGTTGAAGAGTTGATTGAGAAGGCTGATGGATTCGCTGGAGTATTTCCAGAACACAAATACGAAATTGTAAAGAAGTTGCAAGAAAGAAAGCACATTTGTGGAATGACTGGAGATGGTGTGAATGATGCTCCTGCTTTGAAGAAGGCAGATATTGGTATTGCTGTTGCTGATGCCACTGACGCTGCACGAGGTGCATCCGACATTGTTCTTACCGAGCCTGGTTTGAGTGTTATCATTAGTGCCGTGTTGACCAGCAGAGCTATCTTCCAAAGGATGAAGAACTATACTATTTATGCAGTCTCCATCACTATCCGTATTGTGGTATGTGTGCAGTCAATGGTTAAACTTGATTTGTTCATTGCAATGTTTGGTTTCATGTTGATTGCTCTCATTTGGAGATTTGATTTCTCTCCCTTCATGGTTTTGATTATTGCCATCTTGAATGATGGTACAATTATGACAATCTCAAAGGACAGGGTGAAGCCATCTCCATTACCTGACAGTTGGAAACTAAAGGAGATTTTCGCAACCGGAATAGTACTTGGTGGGTACTTGGCTTTGATGACGGATAAATTCGGTGTTAGATCCATCCGTCATAATGTAGATGAGATGATGGCTGCTTTGTACCTGCAAGTCAGTATTGTCAGCCAGGCTTTGATTTTTGTTACTAGATCGCGTGGCTGGTCGTATGCTGAGCGACCTGGACTTCTGTTGGTCGGTGCTTTCTTGATTGCACAGCTGGTTGCAACCTTGATCGCAGTATATGCGAACTGGGGATTTGCAAAGATCAAGGGAATCGGATGGGGATGGGCCGGTGTCATCTGGCTTTACAGCATTGTTTTCTATATTCCACTCGATATCATGAAGTTTGCTATTCGTTACATATTGAGCGGAAAGGCATGGCTCAACTTGTTAGAAAACAAGACTGCTTTCACCACCAAGAAAGACTACGGAAAAGAGGAAAGAGAAGCACAATGGGCCCTTGCTCAAAGAACATTACATGGACTTCAACCACCCGAGTCAACAAACATCTTCTCCGAAAAGAGCAGCTACAGAGAACTCTCTGAGATTGCCGAGCAAGCTAAGAGACGTGCCGAGATTGCAAGGCTCCGGGAGCTGAACACACTCAAGGGACACGTCGAGTCCGTGGTGAAGTTGAAGGGACTCGACATTGACACCATTCAGCAGCACTACACAGTGTGA | 2661 | 45.28 | MWNPLSWVMEAAAIMAIALANGGGRGPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEQDASILVPGDVISVKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMLIEILVMYPIQHREYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKEHVILLAARASRTENQDAIDAAMVGMLADPKEARAGIREIHFFPFNPVDKRTALTYIDSNGNWHRASKGAPEQILTLCNCKEDFKRKVFSVIDKFAERGLRSLAVARQEVPEKTKESPGAPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVCVQSMVKLDLFIAMFGFMLIALIWRFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGYLALMTDKFGVRSIRHNVDEMMAALYLQVSIVSQALIFVTRSRGWSYAERPGLLLVGAFLIAQLVATLIAVYANWGFAKIKGIGWGWAGVIWLYSIVFYIPLDIMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPESTNIFSEKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV | 886 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 22344900 | 22349401 | - | MELO3C004004.2.1 | Cme05g01344 | 328407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme05g01344 | 886 | Gene3D | - | 835 | 886 | - | - | |
Cme05g01344 | 886 | Gene3D | - | 28 | 750 | - | - | |
Cme05g01344 | 886 | PRINTS | H+-transporting ATPase (proton pump) signature | 379 | 397 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme05g01344 | 886 | PRINTS | H+-transporting ATPase (proton pump) signature | 494 | 510 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme05g01344 | 886 | PRINTS | H+-transporting ATPase (proton pump) signature | 522 | 538 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme05g01344 | 886 | PRINTS | H+-transporting ATPase (proton pump) signature | 695 | 716 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme05g01344 | 886 | PRINTS | H+-transporting ATPase (proton pump) signature | 553 | 578 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme05g01344 | 886 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 866 | - | - | |
Cme05g01344 | 886 | SUPERFAMILY | HAD-like | 259 | 569 | IPR036412 | - | |
Cme05g01344 | 886 | TIGRFAM | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 1 | 741 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cme05g01344 | 886 | SFLD | p-type atpase | 245 | 573 | IPR044492 | - | |
Cme05g01344 | 886 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 1 | 782 | IPR023298 | - | |
Cme05g01344 | 886 | SFLD | C1.7: P-type atpase like | 245 | 573 | - | - | |
Cme05g01344 | 886 | Pfam | haloacid dehalogenase-like hydrolase | 259 | 536 | - | - | |
Cme05g01344 | 886 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 265 | 271 | IPR018303 | - | |
Cme05g01344 | 886 | PRINTS | P-type cation-transporting ATPase superfamily signature | 545 | 557 | - | - | |
Cme05g01344 | 886 | PRINTS | P-type cation-transporting ATPase superfamily signature | 417 | 428 | - | - | |
Cme05g01344 | 886 | PRINTS | P-type cation-transporting ATPase superfamily signature | 439 | 449 | - | - | |
Cme05g01344 | 886 | PRINTS | P-type cation-transporting ATPase superfamily signature | 263 | 277 | - | - | |
Cme05g01344 | 886 | PRINTS | P-type cation-transporting ATPase superfamily signature | 522 | 541 | - | - | |
Cme05g01344 | 886 | PRINTS | P-type cation-transporting ATPase superfamily signature | 113 | 127 | - | - | |
Cme05g01344 | 886 | SUPERFAMILY | Calcium ATPase, transduction domain A | 66 | 163 | IPR008250 | - | |
Cme05g01344 | 886 | Pfam | E1-E2 ATPase | 65 | 242 | - | - | |
Cme05g01344 | 886 | Gene3D | - | 275 | 422 | IPR023299 | GO:0000166 | |
Cme05g01344 | 886 | PANTHER | PLASMA MEMBRANE ATPASE | 1 | 866 | - | - | |
Cme05g01344 | 886 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 497 | 613 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme05g01344 | 886 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 35 | 282 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme05g01344 | 886 | Gene3D | - | 260 | 559 | IPR023214 | - | |
Cme05g01344 | 886 | Gene3D | - | 66 | 150 | - | - | |
Cme05g01344 | 886 | CDD | P-type_ATPase_H | 1 | 776 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Cme05g01344 | 886 | Coils | Coil | 837 | 857 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g01344 | Cme-Chr5:22344900 | Cme05g01855 | Cme-Chr5:27319766 | 0 | dispersed | |
Cme02g01583 | Cme-Chr2:22885271 | Cme05g01344 | Cme-Chr5:22344900 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme05g01344 | K01535 | - | csv:101221564 | 1641.71 |