Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme05g01459 | ATGGGTTTTGTTGAAGAATACTTGCCAGCAATGGCTATGTTTGGGCTTCAAGTGACTTATGCCATAATGGCTCTTCTCTCTAGGGCTGCTCTTTTGAAGGGCATGAGTCCTAGAGTTTTTGTTGTTTATAGGCAGGCCGTTGCCACTCTCTTTATTGCACCCATTGCTTATTTTTCCAGGTCGAAATCTAGGAGGGTGTCTATGAACTTGAGGAGCTTTTCTCTAATCTTCATTGCTTCTCTTGTCGGTGTAACGATGAACCAAAACGTTTACTTTGAGGGAGTTTTTTTAGTTAGTTCGTCAATGGCGACGGCGATGACTAATTTGATTCCGGCGGTGACGTTTGTAATAGCAACGATTGTCGGGATGGAGAATTTGAAGATGGGAAGCTTGAGGAGCATGGCAAAGATTGGAGGGACAGTGGTTTGTGTGAGTGGAGCCATGTGCATGGCTCTCCTAAGAGGACCAAAGCTTATCAATTCAACACAAGGTTTTGGGTTGAAATCTACATTATTTGGTGTGGAAAGTGGAGGCCAAACTGCTTGGTTATTGGGTTCCTTGTGTCTCTTTGGCAGTTGTTGTTGCTGGTCAATTTGGTTGATTTTGCAGGTACCAGCTTCAGCCAGCTATCCAGACAATTTATCCTTATCAGCGTGGATGTGTTTGATGGCCACAATTCAATCTGCCATTCTTACTCTATTGGTTGAACCAATCAATCTACAAACTTGGAAAATACATTCAACTATTGAACTTATTTGTTATCTTTTCTCGGGAATTGTTGGGTCAGGTGTTGCGTTCTTTGTTCAAGCTTGGTGTGTTTCAAAGAGAGGACCTGTCTTCTCAGCAATGTTCAACCCTCTCTGCACCATTGTTACAACCATTTTGGCTGCTATTGTTCTTCATGAACAAATATTTACTGGAAGCTTGTTGGGGGGCGTGGCTGTGATTATTGGATTGTACATTGTTCTTTGGGGAAAAGCAAAAGATTATGTGAAGGAAGAAGCCAAATTAGGAAAGCCAAGTTTTGATCAAAAAGAAGAGATTTGTGAATCACTTGAGAGACGAAGCACTGATCAAATTGATTTGGAGGAACCACTTTTGTCGTCTAAAGAATAA | 1116 | 41.67 | MGFVEEYLPAMAMFGLQVTYAIMALLSRAALLKGMSPRVFVVYRQAVATLFIAPIAYFSRSKSRRVSMNLRSFSLIFIASLVGVTMNQNVYFEGVFLVSSSMATAMTNLIPAVTFVIATIVGMENLKMGSLRSMAKIGGTVVCVSGAMCMALLRGPKLINSTQGFGLKSTLFGVESGGQTAWLLGSLCLFGSCCCWSIWLILQVPASASYPDNLSLSAWMCLMATIQSAILTLLVEPINLQTWKIHSTIELICYLFSGIVGSGVAFFVQAWCVSKRGPVFSAMFNPLCTIVTTILAAIVLHEQIFTGSLLGGVAVIIGLYIVLWGKAKDYVKEEAKLGKPSFDQKEEICESLERRSTDQIDLEEPLLSSKE | 371 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 24036188 | 24040411 | - | MELO3C004103.2.1 | Cme05g01459 | 328522 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme05g01459 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 43 | 152 | - | - | |
| Cme05g01459 | 371 | PANTHER | WAT1-RELATED PROTEIN | 10 | 337 | IPR030184 | GO:0016021|GO:0022857 | |
| Cme05g01459 | 371 | Pfam | EamA-like transporter family | 184 | 323 | IPR000620 | GO:0016020|GO:0016021 | |
| Cme05g01459 | 371 | Pfam | EamA-like transporter family | 12 | 130 | IPR000620 | GO:0016020|GO:0016021 | |
| Cme05g01459 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 221 | 327 | - | - | |
| Cme05g01459 | 371 | PANTHER | WAT1-RELATED PROTEIN | 10 | 337 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cme02g01012 | Cme05g01459 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme02g01012 | Cme-Chr2:15104033 | Cme05g01459 | Cme-Chr5:24036188 | 1.60E-109 | dispersed | |
| Cme05g01459 | Cme-Chr5:24036188 | Cme10g00733 | Cme-Chr10:4653085 | 4.63E-71 | dispersed | |
| Cme09g01897 | Cme-Chr9:23094473 | Cme05g01459 | Cme-Chr5:24036188 | 6.54E-09 | transposed | |
| Cme02g01011 | Cme-Chr2:15099120 | Cme05g01459 | Cme-Chr5:24036188 | 1.46E-120 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme05g01459 | - | - | csv:101213601 | 682.559 |