Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g01521 ATGGAAGGAGATGATATTACAGCATTAATAGGGATGATTATATTACAAATATGTTATGCTGGTATTAACATTATCTCTAAACTTGCTATGCAATCTGGAATGAACCCTCTTGTTCTTCTCACTTATAGACAGATTTTTGGCACTTTGGCCATTGCTCCTTTTGCCTTTTTCACTGAAAGGAAAACAAGGCCAAAGATCACTTTTACAGTTTTGTTTCAAATCTTTGTGTGTTCCTTATCAGGAGCAACAGGGAACCAGATATTCTTCTTTGTTGGGTTAAAGTACACAAACCCAACAATTTCAAGTGCTATGGCCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAATCTGGTTTTGCAAAGGTAATAGGGACAATTGTGTGTGTAAGTGGAGCAATGCTACTGTCTTTCTACCATGGACACATCATTAACTTAGGTGAATCAAAAATTCATTGGTCATATGTTGAGAGATTGATCAAGGAAACAACCCCGACGAACGGTCAAGGAAAGCACGTACTCGGTTCGATTTTGTTGCTTTTGAGCTCTTTTGCATGGGCATTATGGTTTGTCATCCAAGCAAGATTGAGTGTCAAGTTCAAAGCTCCCTATACAAGTACTGCATTGCTGTGCTTCATGGCCTTTTTCCAATGTGGACTTATAGCTGTGATTTCAGAGCACAATATTGCTGCTTGGTCTTTGAAAAGTACAATCCGACTCATCGCAGCTCTTTATGCAGGAGTTGTGTGTTCTGCATTGACATTTAGTATCACTTCATGGGCTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCTCCCCTTTATTGCTTATCATTGTGGCCATCCTTAGTTGGGCTCTCCTCCATCAACAACTCCACGTTGGAACAGTTATTGGCTCTGTTTTGATAATTATTGGGCTTTATGCTGTGCTATGGGGAAAATCCAAAGAGATGAAAGTAGAAGATCATCAACACAACATGGAAAAGGCAACTATAGAAAAGCATAATGGAAGTCATATTGTTGAAGAGAAGGATGATTTGGAATTGCAAATCACAAACATCAAATAA 1107 38.84 MEGDDITALIGMIILQICYAGINIISKLAMQSGMNPLVLLTYRQIFGTLAIAPFAFFTERKTRPKITFTVLFQIFVCSLSGATGNQIFFFVGLKYTNPTISSAMANVLPAATFILAVLFRQESVRIKTKSGFAKVIGTIVCVSGAMLLSFYHGHIINLGESKIHWSYVERLIKETTPTNGQGKHVLGSILLLLSSFAWALWFVIQARLSVKFKAPYTSTALLCFMAFFQCGLIAVISEHNIAAWSLKSTIRLIAALYAGVVCSALTFSITSWAIQRKGPLYVSIFSPLLLIIVAILSWALLHQQLHVGTVIGSVLIIIGLYAVLWGKSKEMKVEDHQHNMEKATIEKHNGSHIVEEKDDLELQITNIK 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24596901 24599535 + MELO3C004162.2.1 Cme05g01521 328584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g01521 368 Pfam EamA-like transporter family 9 148 IPR000620 GO:0016020|GO:0016021
Cme05g01521 368 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Cme05g01521 368 PANTHER WAT1-RELATED PROTEIN 8 341 IPR030184 GO:0016021|GO:0022857
Cme05g01521 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 149 - -
Cme05g01521 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 329 - -
Cme05g01521 368 PANTHER WAT1-RELATED PROTEIN 8 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00769 Cme-Chr5:9386611 Cme05g01521 Cme-Chr5:24596901 2.16E-83 dispersed
Cme05g01521 Cme-Chr5:24596901 Cme12g00762 Cme-Chr12:13844412 1.30E-155 dispersed
Cme05g01521 Cme-Chr5:24596901 Cme04g00502 Cme-Chr4:4070978 3.46E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g01521 - - csv:101217670 692.96