Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g01560 ATGGGAGGTTTGAGTGAGGGTCTAACACAGTTGCTGATACCTGCAGCTGCTCTTCTTGGTATTGGATTTGCTCTTCTTCAATGGCTTTTGGTTTCAAGAGTTAAGGTTTATAGCTACCCTGATGATGAAAGCCAAGAAAACAACTTGATTGAAGGAGGACAAGAGGAAGGTATTGATGATGTCGAGGTTGTTGCAAAGTGTGCCGAAATCCAGAAGGCAATTTCTGTTGGAGCAACCTCATTTTTATTCACACAGTATAAATACCTTGTTGTCTTTATGGGAGCATTTGGAGCCATCATTTTCTTATTCCTTGGTTCTGTTAAGAGCTTCAGTACCAAAAGTGAACCTTGCACATACAACAAAGGACAAATGTGTAAACCAGCTCTAGCCAATGCCATTTTTAGCACAATTGCCTTCTTGCTAGGTGCTCTCACCTCAGTGCTATCTGGTTTTCTTGGAATGAAGATTGCAACTTATGCGAATGCACGAACGAGTCTAGAAGCACGGAGAGGCATTGGAAGAGCATTCGTTATTGCTTTTCGCTCTGGTGCGGTGATGGGATTCCTTCTAGCTGCCAATGGTCTCCTTGTGTTGTATGCCTCCATCAATCTGTTTAAACTGTATTATGGCGATGATTGGGAAGGATTGTACGAATCCATCACAGGTTACGGTCTTGGAGGTTCTTCAATGGCATTGTTTGGAAGAGTTGGGGGTGGTATATACACAAAAGCGGCGGATGTTGGAGCTGATCTTGTAGGAAAAATTGAAAAGAATATTCCTGAGGATGATCCAAGAAATCCTGCTGTCATAGCGGACAATGTGGGAGACAATGTCGGAGATATTGCAGGAATGGGATCTGACTTATTTGGATCTTATGCAGAATCAACCTGTGCCGCGCTTTTCGTGGCATCAATATCGTCCTTTGGCTCTACACATAACTATGCAGCCATGTCCTACCCTCTACTTATAAGCTCAATGGGAATTGTAATTTGCTTAATAACTACACTTTTTGCAACTGACCTCATTGAGATTAAGAAAGTGAGCGATATCGAACCATCATTAAAGCGACAACTTCTTATCTCCACTGTTTTGATGACAGTAGGAGTAGCTCTAGTCAGCTTTGTTGCTTTACCTTCAAAGTTCACTCTTTATGATTTCGGCAACGACAAGGTCGTAAAGAACTGGTACGACTTCATCAATTACAAGATTTTTTCCTTCCCTCATAAACACAAGTCTTTTATGCTGACTAAAATTACATCCAAATGCAGGCACATTTTCTTCTGTGTTGTGACAGGATTATGGGCAGGACTTGTTATTGGATATACAACTGAGTATTACACTAGCAATGCTTACAGCTTAACCTTTTGGATCAATCAACGAAATGGTATCAAAGCTCGAGGTCCAAGAGGTTATAACTCAAGAACAGAACTCAAGATAATTCTCGAGCTAATGTATAAGAGAGAGTGTTTAAGTGTTGCAAGCTTACAGAGAAGCATTGATATGCAATCTGATATGAGCTGTGTTTATAGCCTGAGAAATTTGATACTTAAGGATGTGGCTGATTCTTGCAGAACTGGTGCCGCAACAAATGTAATATTTGGATTAGCTCTTGGATACAAGTCCGTCATCATTCCCATATTTTCCATTGCCTTATCCATTTATGTGAGCTTCCGCTTGGGGGCTATGTATGGTATTGCAATGGCTGCTTTGGGAATGCTTAGCACCATTGCCACTGGACTAGCCATTGATGCTTATGGTCCAATAAGTGACAATGCAGGTGGAATAGCCGAAATGGCTGGAATGAGCCACGAAATACGCGAGAGAACCGATGCTTTAGACGCTGCAGGAAACACGACTGCAGCCATAGGAAAGGGCTTTGCCATTGGATCAGCTGCTCTTGTTTCCCTCGCCTTGTTCGGCGCCTTCGTAAGCCGAGCAGACATCGAAACAGTCAACGTCATGAACCCAAAAGTTTTCATAGGATTGATAGTGGGTGCAATGCTTCCATACTGGTTTTCAGCCATGACAATGAAGAGTGTTGGCAGCGCAGCACTGAAGATGGTCGAGGAAGTTCGACGACAATTCAACTCTATCCCTGGGCTGATGGAAGGCAGGACGAAGCCGGACTATGCAAATTGTGTGAAGATATCAACCGATGCTTCACTTAAAGAGATGATCCCACCCGGTGGTCTTGTTTTGGTAACACCACTCATTGCTGGAACATTCTTTGGAGTTGAAACTCTTGCTGGCCTTTTGGCTGGTTCTCTTGTTTCTGGAGTGCAGGTTGCTATCTCTGCTTCAAACACAGGTGGGGCTTGGGATAATGCAAAAAAGTACATTGAGGTT 2346 42.97 MGGLSEGLTQLLIPAAALLGIGFALLQWLLVSRVKVYSYPDDESQENNLIEGGQEEGIDDVEVVAKCAEIQKAISVGATSFLFTQYKYLVVFMGAFGAIIFLFLGSVKSFSTKSEPCTYNKGQMCKPALANAIFSTIAFLLGALTSVLSGFLGMKIATYANARTSLEARRGIGRAFVIAFRSGAVMGFLLAANGLLVLYASINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIEKNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGSTHNYAAMSYPLLISSMGIVICLITTLFATDLIEIKKVSDIEPSLKRQLLISTVLMTVGVALVSFVALPSKFTLYDFGNDKVVKNWYDFINYKIFSFPHKHKSFMLTKITSKCRHIFFCVVTGLWAGLVIGYTTEYYTSNAYSLTFWINQRNGIKARGPRGYNSRTELKIILELMYKRECLSVASLQRSIDMQSDMSCVYSLRNLILKDVADSCRTGAATNVIFGLALGYKSVIIPIFSIALSIYVSFRLGAMYGIAMAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRADIETVNVMNPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLMEGRTKPDYANCVKISTDASLKEMIPPGGLVLVTPLIAGTFFGVETLAGLLAGSLVSGVQVAISASNTGGAWDNAKKYIEV 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 24875677 24880838 + MELO3C004193.2.1 Cme05g01560 328623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g01560 782 Pfam Inorganic H+ pyrophosphatase 516 781 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme05g01560 782 Pfam Inorganic H+ pyrophosphatase 48 455 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme05g01560 782 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 420 453 - -
Cme05g01560 782 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 5 399 - -
Cme05g01560 782 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 516 781 - -
Cme05g01560 782 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 516 781 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme05g01560 782 PIRSF H+-PPtase 505 782 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme05g01560 782 PIRSF H+-PPtase 21 463 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme05g01560 782 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 399 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cme05g01560 782 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 420 453 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01129 Cme-Chr2:16296979 Cme05g01560 Cme-Chr5:24875677 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g01560 K23025 - csv:101205277 1177.54