Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g01586 ATGGCTTCCAACACCTTGATGAGCTGTGGCATTGCCACCACCGCTTTCCCTTCAGTCCTTTCTTCTTCTAAGTCTAAATTCGCAGCCGCTGTCCCCATTTCCGGTGTCGCTGTCAATGCATCTTCCCGATTTTCCATGTCCTCTGAGTGGATGCCTGGCCAGCCCCGTCCCCCCTACCTCGATGGCTCAGCTCCTGGTGATTTTGGATTCGACCCTCTTCGGCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCTGAGGCTTTGGGATTGGGCAACTGGGTGAAAGCTCAAGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACATACTTGGGACAACCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCTTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGACCCATTAGGCTACTCAAAAGATCCTGAAAAGTTGAAGGAATACAAAGTGAAAGAGATCAAAAACGGTAATTGCTCTCATTTCTTTCATATCAATTAG 621 49.76 MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSSEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGNCSHFFHIN 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 25072486 25074684 - MELO3C004214.2.1 Cme05g01586 328649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g01586 206 Pfam Chlorophyll A-B binding protein 57 197 IPR022796 -
Cme05g01586 206 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 22 197 - -
Cme05g01586 206 Gene3D Chlorophyll a/b binding protein domain 51 200 - -
Cme05g01586 206 SUPERFAMILY Chlorophyll a-b binding protein 40 197 - -
Cme05g01586 206 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 197 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02045 Cme-Chr3:27959543 Cme05g01586 Cme-Chr5:25072486 9.27E-28 dispersed
Cme05g01586 Cme-Chr5:25072486 Cme08g02519 Cme-Chr8:32104340 9.46E-33 dispersed
Cme12g01982 Cme-Chr12:25597529 Cme05g01586 Cme-Chr5:25072486 1.00E-08 dispersed
Cme05g01586 Cme-Chr5:25072486 Cme08g00160 Cme-Chr8:1124451 3.95E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g01586 K08907 - csv:101211428 398.667