Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g01785 ATGGCGTCTCGGAGGATATCCTCACTCTTATCTCGTTCCATTTCTTCTTCTTCTTCTTCGCTCCACCTTTCCAAAGGGAAAAGGGGTTTTAATGGAAGAACAATTGCTAAATATAGTACTGCATCTGCTGTTGAAGATCCTATCACTCCATCTGTGAAAGTGAATTATAATCAGTTATTGATTAATGGACAGTTTGTGGATTCAGTCTCAGGAAAAACGTTTCCTACTTTGGATCCAAGATCTGGGGAAGTCATTGCTAATGTTGCTGAAGGTGATGCTAGAGATGTTGATATTGCAGTTTCTGCTGCACGCAAGGCGTTTGATGAAGGGCCTTGGCCTAAAATGACTGCTTATGAAAGGTCAAAGATAATTTTGAGGTTTGCAGATTTGGTTGAAAAGCATGCGGAAGAAGTTGCAGCACTCGAAACATGGGATAATGGGAAAACATATGAACAATCTTTAAAAATTGAAGTCCCGATGTTCGTACGTCTCTTTCGATACTATGGCGGATGGGCGGATAAGATCCATGGACTCACAGTTCCTGCCGATGGCCCATATCATGTACAAACCTTGCACGAACCTATTGGTGTGGCGGGTCAGATCATTCCATGGAACTTTCCTCTGCTTATGTTTGCTTGGAAAGTCGGCCCAGCGTTAGCATGTGGGAATACTATTGTTCTGAAGACAGCTGAGCAAACACCTTTGTCTGCTTTATTGGTGGCTAAGCTATTCCATGAGGCTGGACTTCCTGAGGGCGTTTTGAATATTGTTTCTGGATATGGACCTACTGCTGGTGCTGCTCTTGCTAGTCATATGGAAGTTGATAAACTTGCTTTTACTGGATCAACCGAAACAGGGAAGGTTGTACTTGAATTAGCCGCAAAAAGCAATCTGAAGCCAGTAACATTGGAGCTTGGCGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTAGACAAGGCTGTGGAAATGGCACACTTTGCTCTCTTCTTCAACCAGGTACTTCAAAAAAAAAAAAAGGAAAACTTGCCAGGATCATATAACCGTTTTGATCTTCCACTAAAAGAATGGTTCTCTTACAGGGACAATGTTGCTGTGCTGGTTCTCGTACTTTTGTTCATGAAAAAGTATACGACGAGTTTCTAG 1149 42.38 MASRRISSLLSRSISSSSSSLHLSKGKRGFNGRTIAKYSTASAVEDPITPSVKVNYNQLLINGQFVDSVSGKTFPTLDPRSGEVIANVAEGDARDVDIAVSAARKAFDEGPWPKMTAYERSKIILRFADLVEKHAEEVAALETWDNGKTYEQSLKIEVPMFVRLFRYYGGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALLVAKLFHEAGLPEGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTETGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQVLQKKKKENLPGSYNRFDLPLKEWFSYRDNVAVLVLVLLFMKKYTTSF 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26836976 26841043 + MELO3C004383.2.1 Cme05g01785 328848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g01785 382 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 339 IPR016162 GO:0016491
Cme05g01785 382 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 303 310 IPR029510 GO:0016491
Cme05g01785 382 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 24 335 - -
Cme05g01785 382 Pfam Aldehyde dehydrogenase family 65 334 IPR015590 GO:0016491
Cme05g01785 382 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 24 335 - -
Cme05g01785 382 SUPERFAMILY ALDH-like 54 334 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01959 Cme-Chr2:25859064 Cme05g01785 Cme-Chr5:26836976 0 dispersed
Cme05g01785 Cme-Chr5:26836976 Cme11g01643 Cme-Chr11:24293435 4.33E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g01785 K00128 - csv:101202756 615.535