Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme05g01814 | ATGGGTACTCCAGTTAACATTATTGTAGGTTCTCATGTCTGGATCGAAGATCCAGAAGTTGCTTGGCTCGATGGACAGGTGTCCAAGATTACAGGACAGGAAGCTGAGATCCAAGCCAGCAATGGAAAAAAAGTTGTTGCAAAATTATCCAAAATATACCCCAAAGATATGGAAGCTCCAGCTGGTGGCGTTGATGACATGACAAAGCTATCTTACTTGCATGAGCCTGGAGTTCTACAAAATTTAAAAATACGATACGAACTCAATGAAATCTATACATACACTGGCAATATTCTTATTGCTATTAATCCATTCCAAAGATTGCCTCATCTTTATGATGGTCACATGATGCAACAATACAAAGGAGCGCCATTTGGAGAACTGAGTCCTCATGTTTTTGCTGTTGCTGATGTTGCATACAGGGCAATGATTAATGAGGGTAAAAGCAATTCAATTCTGGTCAGTGGTGAAAGTGGAGCAGGGAAGACTGAAACCACAAAAATGCTCATGAGGTACCTTGCATTTTTAGGTGGCCGGGCGGCCACTGAAGGACGAACAGTTGAGCAACAAGTGCTTGAGTCAAATCCAGTGCTCGAAGCTTTTGGAAATGCTAAAACCGTCAGAAATAACAATTCCAGTCGATTTGGTAAATTCGTTGAAATCCAGTTTGACAAGCATGGGAGAATCTCAGGAGCAGCTATCCGAACTTACCTCCTCGAGAGATCTCGTGTTTGCCAAGTTTCTGATCCTGAGCGAAACTATCATTGCTTTTACCTCCTTTGTGCTGCACCTCAGGAGGAAATTGAAAAATACAAGTTGGGAAATCCCAGGTCATTTCATTATCTAAATCAATCAAATTGCTATGAGCTGGTTGATGTAAGTGATGCTCATGACTATCTTGCCACTAGAAGAGCTATGGATGTTGTTGGCATAAGTGCGAAGGAGCAGGAAGCAATCTTTAGGGTTGTTGCTGCAATTCTTCATCTTGGAAACATTGAATTTACTAAGGGAAAAGAAGTTGATTCATCAATTCCAAAAGATGACAAGGCCAAATTCCATCTTAAAATGACTTCAGAGCTTCTCATGTGTGATAATGCTGGCCTTGAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTGATAAAACGTAGCTTGGATCCTCAAAGTGCAGCTGTTAGTCGTGATGGTTTGGCTAAAACTATATATTCTCGACTATTTGACTGGCTGGTTGATAAAATTAATGTCTCAATTGGACAAGATCCTAACTCAAAATCCCTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTCAAAGCTAACAGTTTTGAGCAGTTCTGCATTAACTTCACAAACGAGAAGTTACAGCAACATTTCAATCAGCACGTTTTCAAAATGGAACAAGAAGAATATACAAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTCGACAACCAAGATGTGTTAGATCTTATTGAAAAGAAACCCGGTGGAATTGTGGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAGACATTTGCTAACAAACTCTATCAGACTTTCAAAACACATAAGCGGTTTATAAAGCCAAAACTTTCTCGAACAGATTTTACCATTGCTCATTATGCTGGAGAGGTTTTGTATCAATCTGATCAGTTTTTGGACAAAAACAAGGATTATGTAGTTCCTGAACATCAGGATTTGTTAGGTGCATCCAAATGTTCATTTGTTGCTGGTCTTTTCCCCCCTCTAAAAGAAGAATCTGCAAAATCTTCCAAGTTTTCTTCAATTGGATCTCGCTTTAAGCTACAACTACAACAGTTAATGGAGACACTAAATTCCACAGAACCTCACTACATCAGATGTGTGAAGCCAAACAACCTCTTGAAACCTGCCATATTTGAGAATGTCAACATTATGCAACAACTACGTTGTGGTGGTGTCTTAGAGGCAATCAGAATCAGCTGTGCTGGGTACCCTACTCGCCGTGCATTCTTTGAATTCATTAACCGATTTGGAATTTTATCTCAAGAATCCTTAGAAGGAAACTACGATGAAAAGACTGTTTGCAAAAAGATATTAGAAAAGCAGGGACTTAAAGGGTTTCAGATAGGTAAGACAAAAGTATTCTTGAGGGCTGGTCAGATGGCTGAATTAGATGCTCGGAGAGCAGAGGTATTGAGTAATGCAGCAAAGACTATTCAACGGCGCACACGAACCCATATTGCTCGTAAACAGTTCTTTGCATTACGAAAGGCAACCATATACGTGCAATCTAGATGGAGAGGAAAACTGGCTTGCAAACTTTTCAAGAATTTGAAGAGAGAGGCAGCTGCTGTGAAAATTCAGAAAAGTGCTCGAAGATTTCATGCAAGAAAAGCCTACAAAAGACTACAAGCCTCAGTGCTTTATGTGCAAACTGGATTAAGGGCAATGGCAGCTAGGAATGAATTCAGATTTAGGAAGCAGACAAAGGCGGCAATTATCATTCAGGCTCGATGGCGTTGCCATAAAGCTGCGTCATACTATAAGAAACTTCAAAGAGGCTCAATAGTTGCACAATGTAGATGGAGGGGAAAAATTGCTAGAAAGGAACTTAGAAAACTCAAATTGGCTGCAAGGGAGACTGGTGCACTTAAAGAAGCAAAGGACAAGTTGGAAAAGAAAGTGGAGGAACTTACTTGGCGCATACAGTTAGAAAAACGCCTAAGGACGGACCTGGAAGAGGCAAAAGCTCAGGAGATAGGAAAGTTACAAAATTCTTTGCAAGAACTGCAGACTAAAGTTGATGAAACTAACTCATTGCTCGTAAAGGAGCGAGAGGCTGCAAAGAAGGCTGTTGAAGAAGCACCTCCTGTTATTCAAGAAACACAAGTTCTGGTTGAAGATACCAAGAAAATTGATGATTTGACAGCAGAAGTAGAAAGCTTAAAGACCTCACTAGAGGCCGAGAAAAACAGAGCTGATGAATCTGAGAAAAAATGTAGTGAAGTAGAACAGTCTAGAGAAGAACAACGTAAAAAGTTAGAAGATACAGAGAAAAAAGCTCATCAGCTCCAGGAGTCATTGACCAGGCTAGAAGAGAAGCTTTCCAATTTGGAATCAGAGAATCAAGTTTTGCGCCAACAAGCTTTGTCTATGGCACCTAATAAAATCCTCTCAGGACGGTCTAGATCAATTCTTCAGGATCTACACAGCCCCTCTATTAACCAAAGGGATTCAGAAGTAGAGGATAAACCTCAAAAATCACTTAATGATAAACAACAAGAGAATCAAGATTTGCTCATTAGATGTATTGCACAGCACCTTGGCTTTGCAGGAAACAGGCCAATTGCTGCTTGTATCATCTACAAGTGTCTGCTTCAGTGGAGGTCGTTTGAAGTCGAACGTACCAGTGTGTTTGATAAGATAATTCAAACTATAGGCCATGCAATTGAGTCTCAGGATAACAATGATGTCTTGGCCTATTGGTTATCCAACGCTTCAACGCTTCTCTTACTGCTTCAACGTACATTGAAAGCAAGTGGTGCTGCTGGAATGGCTCCACAACGTCGAAGATCATCGTCAGCTACAATATTTGGGAGGATGACGCAAAGTTTCCGAGGAGCTCCACAAGGAGTCAATCTATCCTTAATCAATGGTGGAACAAGTGGTGGAGTGGACACTTTAAGGCAAGTTGAAGCGAAGTACCCTGCTTTGCTTTTCAAGCAGCAGCTGACAGCCTATGTAGAGAAAATTTATGGAATGATAAGAGATAATCTGAAGAAAGAAATTTCTCCATTGCTAGGATTGTGCATCCAGTCTAACCCTTATTCATGTAATATGGAAAAGGCACCAAGAACATCAAGGGCAAGTTTGGTAAAGGGATCTTCTCGTTCTGTTGCCAACACCGAGGCCCAACGTGCCTTAATTGCTCACTGGCAAGGAATTGTGAAGAGCCTCGGAAACTTCTTAAACACCTTAAAAGCAAATCATGTACCCCCATTTTTGGTTCGCAAAGTCTTCATACAAATATTTTCTTTCATCAACGTCCAACTGTTTAACAGTCTTTTATTACGACGAGAATGTTGTTCATTTAGCAATGGTGAATACGTCAAAGCTGGGCTGTCCGAATTAGAGCATTGGTGTTATAAAGCTACTGATGAGTATGCAGGTTCTGCTTGGGACGAGCTAAAGCATATTAGACAAGCGATCGGGTTTCTGGTTATTCATCAGAAGCCAAAGAAGACATTAGATGAAATAAGTCACGATCTGTGTCCGGTACTAAGTATACAGCAGCTGTATCGTATAAGTACGATGTACTGGGATGACAAATATGGCACCCATAGTGTTTCACCCGATGTTATATCCAATATGAGAGTGTTAATGACCGAAGATTCAAACCATGCAATTAGCAATTCATTTCTATTGGACGACGATTCAAGCATTCCATTCTCTGTTGATGATTTATCAAAGTCTATGGAACAAATAGACATCGGAGATATCGAACCACCACCACTGATTCGGGAAAACTCGGGCTTTAGTTTCTTGTTACCACGAACAGACTAA | 4572 | 40.53 | MGTPVNIIVGSHVWIEDPEVAWLDGQVSKITGQEAEIQASNGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQVSDPERNYHCFYLLCAAPQEEIEKYKLGNPRSFHYLNQSNCYELVDVSDAHDYLATRRAMDVVGISAKEQEAIFRVVAAILHLGNIEFTKGKEVDSSIPKDDKAKFHLKMTSELLMCDNAGLEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINVSIGQDPNSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLKEESAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGILSQESLEGNYDEKTVCKKILEKQGLKGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKTIQRRTRTHIARKQFFALRKATIYVQSRWRGKLACKLFKNLKREAAAVKIQKSARRFHARKAYKRLQASVLYVQTGLRAMAARNEFRFRKQTKAAIIIQARWRCHKAASYYKKLQRGSIVAQCRWRGKIARKELRKLKLAARETGALKEAKDKLEKKVEELTWRIQLEKRLRTDLEEAKAQEIGKLQNSLQELQTKVDETNSLLVKEREAAKKAVEEAPPVIQETQVLVEDTKKIDDLTAEVESLKTSLEAEKNRADESEKKCSEVEQSREEQRKKLEDTEKKAHQLQESLTRLEEKLSNLESENQVLRQQALSMAPNKILSGRSRSILQDLHSPSINQRDSEVEDKPQKSLNDKQQENQDLLIRCIAQHLGFAGNRPIAACIIYKCLLQWRSFEVERTSVFDKIIQTIGHAIESQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATIFGRMTQSFRGAPQGVNLSLINGGTSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQSNPYSCNMEKAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFIQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNHAISNSFLLDDDSSIPFSVDDLSKSMEQIDIGDIEPPPLIRENSGFSFLLPRTD | 1523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 27032434 | 27045727 | - | MELO3C004411.2.1 | Cme05g01814 | 328877 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme05g01814 | 1523 | ProSiteProfiles | Dilute domain profile. | 1143 | 1466 | IPR002710 | - | |
| Cme05g01814 | 1523 | SMART | DIL_2 | 1341 | 1448 | IPR002710 | - | |
| Cme05g01814 | 1523 | Coils | Coil | 916 | 950 | - | - | |
| Cme05g01814 | 1523 | SMART | MYSc_2a | 57 | 733 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | Gene3D | - | 667 | 730 | - | - | |
| Cme05g01814 | 1523 | CDD | MYSc_Myo11 | 76 | 720 | IPR036018 | - | |
| Cme05g01814 | 1523 | Gene3D | - | 439 | 623 | - | - | |
| Cme05g01814 | 1523 | ProSiteProfiles | IQ motif profile. | 854 | 883 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | ProSiteProfiles | IQ motif profile. | 735 | 762 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | ProSiteProfiles | IQ motif profile. | 806 | 835 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | Pfam | Myosin N-terminal SH3-like domain | 9 | 51 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | CDD | MyosinXI_CBD | 1094 | 1489 | IPR037975 | GO:0007015 | |
| Cme05g01814 | 1523 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 785 | 883 | IPR027417 | - | |
| Cme05g01814 | 1523 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | Pfam | IQ calmodulin-binding motif | 737 | 755 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | Pfam | IQ calmodulin-binding motif | 785 | 804 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | Pfam | IQ calmodulin-binding motif | 759 | 778 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | Pfam | IQ calmodulin-binding motif | 832 | 852 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | Pfam | DIL domain | 1342 | 1445 | IPR002710 | - | |
| Cme05g01814 | 1523 | ProSiteProfiles | Myosin motor domain profile. | 62 | 732 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | PRINTS | Myosin heavy chain signature | 429 | 457 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | Coils | Coil | 968 | 1051 | - | - | |
| Cme05g01814 | 1523 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 601 | - | - | |
| Cme05g01814 | 1523 | ProSiteProfiles | IQ motif profile. | 783 | 810 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | Coils | Coil | 877 | 911 | - | - | |
| Cme05g01814 | 1523 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 38 | 785 | IPR027417 | - | |
| Cme05g01814 | 1523 | MobiDBLite | consensus disorder prediction | 1078 | 1094 | - | - | |
| Cme05g01814 | 1523 | MobiDBLite | consensus disorder prediction | 1071 | 1095 | - | - | |
| Cme05g01814 | 1523 | Gene3D | - | 833 | 882 | - | - | |
| Cme05g01814 | 1523 | Gene3D | - | 733 | 784 | - | - | |
| Cme05g01814 | 1523 | Gene3D | - | 785 | 832 | - | - | |
| Cme05g01814 | 1523 | Pfam | Myosin head (motor domain) | 64 | 720 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cme05g01814 | 1523 | PANTHER | MYOSIN-9 | 6 | 1520 | - | - | |
| Cme05g01814 | 1523 | ProSiteProfiles | IQ motif profile. | 758 | 787 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | PANTHER | MYOSIN | 6 | 1520 | - | - | |
| Cme05g01814 | 1523 | Gene3D | Kinesin motor domain | 65 | 662 | IPR036961 | - | |
| Cme05g01814 | 1523 | ProSiteProfiles | IQ motif profile. | 831 | 858 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | MobiDBLite | consensus disorder prediction | 989 | 1028 | - | - | |
| Cme05g01814 | 1523 | Gene3D | - | 252 | 310 | - | - | |
| Cme05g01814 | 1523 | SMART | iq_5 | 830 | 852 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | SMART | iq_5 | 853 | 875 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | SMART | iq_5 | 757 | 779 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | SMART | iq_5 | 734 | 756 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | SMART | iq_5 | 805 | 827 | IPR000048 | GO:0005515 | |
| Cme05g01814 | 1523 | SMART | iq_5 | 782 | 804 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme01g02524 | Cme-Chr1:33208856 | Cme05g01814 | Cme-Chr5:27032434 | 0 | dispersed | |
| Cme02g00277 | Cme-Chr2:2309626 | Cme05g01814 | Cme-Chr5:27032434 | 0 | dispersed | |
| Cme03g00912 | Cme-Chr3:17468056 | Cme05g01814 | Cme-Chr5:27032434 | 6.21E-26 | dispersed | |
| Cme03g01384 | Cme-Chr3:23322408 | Cme05g01814 | Cme-Chr5:27032434 | 0 | dispersed | |
| Cme05g01814 | Cme-Chr5:27032434 | Cme06g00435 | Cme-Chr6:2750439 | 0 | dispersed | |
| Cme05g01814 | Cme-Chr5:27032434 | Cme11g02415 | Cme-Chr11:30969291 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme05g01814 | K10357 | - | csv:101206606 | 2877.81 |