Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g01834 GTGAAGAGTAAAAAACAGTTAAAATGCTCACATGGCGAAAGAGAAGCCACTCCCTTGTCTGAGCCTTTCATATTCAAAAGCGTGGCTCTTCTTCCTCCTTCTTCCTATTTAAACCATCAACCCATCACCCAAATTCAGCCACATACTTCCACCAATCTTCCTCTTTCTTATTTTTTTCAAGCTCCCTTCAAATTCCTAAATTCCCCATTTAATTCCTTTTTCTCGTCAATTTCCATGGCGGGTAATGGGGTTTTTGCAGAGATTTTCGACGGTGAAGTCTACAAATACTATTCCCAAGGTGAATGGAAGAAATCCTCCTCAGGGAAATCCGTTGCCATTATCAACCCCACTACTAGGAAGACCCAGTACAGAGTTCAAGCTTGTAACCAAGAGGAGGTTAATAAAGTGATGGAAATAGCCAAATCTGCTCAGAAATTATGGGCAAAGACTCCATTGTGGAAGAGAGCAGAGCTTCTTCATAAAGCTGCTGCAATTTTAAAAGAACATAAAGCTCCAATTGCTGAGTGTTTGGTGAAGGAAATTGCTAAACCAGCCAAAGATGCAGTCACTGAGGTTGTAAGGTCTGGGGATCTTGTTTCATATTGTGCTGAAGAAGGTGTTAGGATTTTGGGTGAAGGGAAGTTCTTGGTTTCTGATAGTTTCCCTGGAAATGAAAGGACCAAATATTGCCTTACTTCCAAGATCCCTCTTGGTGTGATTTTAGCCATTCCTCCATTCAACTATCCTGTCAATCTGGCTGTTTCAAAAATTGCCCCGGCTTTAATTGCTGGAAATTCTATTGTACTGAAGCCTCCAACTCAGGGCGCTGTTTCTGCTCTCCACATGGTACATTGCTTCCATCTAGCTGGTTTTCCTAAAGGCCTTATTAGTTGTGTCACGGGAAAAGGTTCCGAGATTGGTGATTTCCTCACAATGCATCCGGGTGTCGACTGTATAAGCTTTACCGGTGGGGATACCGGTATTGCAATTTCAAAGAAGGCAGGCATGATACCTCTTCAGATGGAATTGGGGGGAAAAGACGCCTGCATTGTGCTCGAGGATGCAGATCTTGATTTAGTTGCCGCTAACATCATAAAGGGAGGCTTTTCTTACAGTGGCCAAAGGTGTACTGCCGTCAAGGTTGTTTTGGTAATGGAATCTGTCGCAGATTCTTTAGTCGAGAAAGTAAAGGCACGAGTGGCTAAATTAACTGTTGGTGCCCCTGAAGACGACTCAGACATTACTCCAGTTGTGACTGAGTCATCGGCGAATTTCATTGAAGGGCTGGTTATGGATGCAAAGGAAAAGGGTGCAACATTTTGCCAAGAGTACAAAAGAGAGGGCAACCTAATTTGGCCCTTGTTATTAGATAATGTTAGGCCTGATATGAGGATTGCATGGGAGGAACCTTTTGGCCCAGTTTTGCCAGTCATTAGGATCAATTCTATCGAAGAAGGAATCCACCATTGTAATGCTAGCAATTTTGGACTTCAGGGATGTGTCTTCACGAAGGACATCAACAAGGCGATATTGATAAGCGACGCAATGGAAACCGGAACAGTTCAAATCAACTCAGCACCTGCTCGAGGACCCGATCATTTCCCATTCCAGGTACCGTAA 1620 43.52 VKSKKQLKCSHGEREATPLSEPFIFKSVALLPPSSYLNHQPITQIQPHTSTNLPLSYFFQAPFKFLNSPFNSFFSSISMAGNGVFAEIFDGEVYKYYSQGEWKKSSSGKSVAIINPTTRKTQYRVQACNQEEVNKVMEIAKSAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVDCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLVEKVKARVAKLTVGAPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSIEEGIHHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQVP 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27189967 27193844 - MELO3C004430.2.1 Cme05g01834 328897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g01834 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 111 343 IPR016162 GO:0016491
Cme05g01834 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 369 380 IPR016160 GO:0016491
Cme05g01834 539 PANTHER ALDEHYDE DEHYDROGENASE 79 537 - -
Cme05g01834 539 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 79 537 - -
Cme05g01834 539 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 341 348 IPR029510 GO:0016491
Cme05g01834 539 SUPERFAMILY ALDH-like 92 536 IPR016161 GO:0016491
Cme05g01834 539 CDD ALDH_F11_NP-GAPDH 93 537 - -
Cme05g01834 539 Pfam Aldehyde dehydrogenase family 102 536 IPR015590 GO:0016491
Cme05g01834 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 346 535 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g01834 Cme-Chr5:27189967 Cme11g01643 Cme-Chr11:24293435 1.10E-56 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g01834 K00131 - csv:101208699 912.138