Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme05g02014 | ATGTCGTGGCAAACGTATGTTGATGATCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTTACCGCCGCTGCCATTGTTGGCCACGACGGCAGCGTTTGGGCTCAGAGCGCCTCATTTCCTCAGTTCAAGTCTGAAGAGATCAATGGTATCATGAAGGATTTTGATGAACCAGGTCATCTTGCACCTACTGGATTACACCTTGGTGGTACAAAGTATATGGTAATCCAAGGAGAGCCTGGAGCGGTCATCCGTGGAAAGAAGGGGTCTGGAGGAATTACTATAAAGAAGACTGGTCAAGCTCTAGTCTTCGGAATCTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTTGTTGAGAGGCTTGGCGATTACCTCGTCGATCAGGGTCTGTAG | 402 | 48.76 | MSWQTYVDDHLMCDIDGQGQHLTAAAIVGHDGSVWAQSASFPQFKSEEINGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL | 133 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 28607837 | 28609545 | - | MELO3C004596.2.1 | Cme05g02014 | 329077 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme05g02014 | 133 | PANTHER | PROFILIN | 1 | 133 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 133 | - | - | |
Cme05g02014 | 133 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Plant profilin signature | 29 | 42 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Plant profilin signature | 54 | 68 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Plant profilin signature | 73 | 82 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Plant profilin signature | 86 | 101 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Plant profilin signature | 106 | 119 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Plant profilin signature | 119 | 132 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | Pfam | Profilin | 1 | 132 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PANTHER | PROFILIN | 1 | 133 | - | - | |
Cme05g02014 | 133 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Profilin signature | 23 | 32 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Profilin signature | 42 | 62 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Profilin signature | 66 | 80 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Profilin signature | 102 | 115 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | PRINTS | Profilin signature | 115 | 132 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | CDD | PROF | 2 | 132 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 132 | IPR036140 | - | |
Cme05g02014 | 133 | SMART | prof_2 | 1 | 133 | IPR005455 | GO:0003779 | |
Cme05g02014 | 133 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g01148 | Cme-Chr4:15693733 | Cme05g02014 | Cme-Chr5:28607837 | 4.96E-76 | dispersed | |
Cme05g02013 | Cme-Chr5:28603802 | Cme05g02014 | Cme-Chr5:28607837 | 1.80E-68 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme05g02014 | K05759 | - | csv:101219322 | 266.159 |