Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme05g02074 ATGGCGGTGAAGAAAATGAAGTGGAGATCCATATTCTCCAGCTGCTGCGAGGTGGAGTCCCAGTCGTCGGAGGTGATGAAAGTAGTGGCCGCCAATGGTAAGCCTAGTTCCTTCCAGAGGATTTCCAAAATCGATTTCACTAACCCTAACTCAACCATCTCCGAGGATCTTTCAATCTCTCTTGCCGGATCTGACATCCACGTCTTCACCCTCGCCGAGTTGAAGCTCATCTCTCAGGCCTTCTCTTCCTCAAACTTCCTTGGAGAGGGTGGCTTCGGCCCCGTCTACAAAGGCTTCCTCGATGACAATCTCAGGCCTGGCTTGCTCCCTCAGCCCGTCGCCATTAAACTCCTCGATTTGGATGGAACCCAAGGCCACAGGGAGTGGCTGACGGAGGTCATTTTTCTAGGGCAACTTAAGCACGCCCATCTTGTCAAGCTAATTGGATATTGCTGCGAAGACGAACATAGGATGCTTGTGTATGAGTATATGCCCAGAGGAAGCTTGGAGAATCAACTTTTCAAAAAATATTCAATCCCATTGCCGTGGTCCACGAGAATGAAGATCGCTCTTGGAGCTGCAAAGGGTCTCGCCTTCCTACACGAAGCAGATAAACCAGTCATTTACCGAGATTTCAAAGCCTCCAACGTACTGCTTGATTCTGATTACACTGCGAAGCTGTCTGATTTTGGTCTGGCCAAAGACGGTCCAGAAGGAGACAACACTCACGTCTCCACCCGAGTAATGGGTACACATGGATATGCGGCGCCGGAGTATATAATGACTGGGCATCTGACGGCGATGAGTGATGTGTATAGCTTTGGAGTAGTGCTTTTGGAGCTGCTGACAGGACGGAGGTCGGTGGAGAAGAGTAGCCGTAAGAGACAACAGAATTTGGCCGAATGGGCGAGGCCGATGCTGAATGATCCCAGGAAGCTAAGCCGTATAATAGACCCCAGACTTGAAGGCCAATACTCCGAAATGGGAGCTCAGAAAGCAGCCTCGTTGGCTTACCAATGCTTAAGCCACCGCCCAAAGCAGAGGCCCACCATGAGCGCCGTCGTCAAGGTATTAGAGCCACTCAAGGATTTCGATGATATTTCTTCAGGCACCTTCGTTTACACGGTTATGGATCAGCCAAATTCAATTCAAGCCTGA 1158 50.17 MAVKKMKWRSIFSSCCEVESQSSEVMKVVAANGKPSSFQRISKIDFTNPNSTISEDLSISLAGSDIHVFTLAELKLISQAFSSSNFLGEGGFGPVYKGFLDDNLRPGLLPQPVAIKLLDLDGTQGHREWLTEVIFLGQLKHAHLVKLIGYCCEDEHRMLVYEYMPRGSLENQLFKKYSIPLPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNVLLDSDYTAKLSDFGLAKDGPEGDNTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVEKSSRKRQQNLAEWARPMLNDPRKLSRIIDPRLEGQYSEMGAQKAASLAYQCLSHRPKQRPTMSAVVKVLEPLKDFDDISSGTFVYTVMDQPNSIQA 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28947038 28949494 + MELO3C004655.2.1 Cme05g02074 329137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme05g02074 385 SUPERFAMILY Protein kinase-like (PK-like) 66 369 IPR011009 -
Cme05g02074 385 PANTHER OS01G0588500 PROTEIN-RELATED 27 381 - -
Cme05g02074 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Cme05g02074 385 Gene3D Transferase(Phosphotransferase) domain 1 164 372 - -
Cme05g02074 385 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 27 381 - -
Cme05g02074 385 CDD STKc_IRAK 87 361 - -
Cme05g02074 385 ProSiteProfiles Protein kinase domain profile. 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme05g02074 385 Gene3D Phosphorylase Kinase; domain 1 44 163 - -
Cme05g02074 385 Pfam Protein tyrosine and serine/threonine kinase 85 358 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme02g00305 Cme05g02074 CCT
Cme02g00305 Cme05g02074 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02806 Cme-Chr1:35070277 Cme05g02074 Cme-Chr5:28947038 2.49E-153 dispersed
Cme05g02074 Cme-Chr5:28947038 Cme07g00169 Cme-Chr7:1107017 6.36E-162 dispersed
Cme02g00305 Cme-Chr2:2514000 Cme05g02074 Cme-Chr5:28947038 1.74E-127 transposed
Cme02g00352 Cme-Chr2:2910613 Cme05g02074 Cme-Chr5:28947038 7.26E-146 transposed
Cme07g01508 Cme-Chr7:20975634 Cme05g02074 Cme-Chr5:28947038 1.90E-155 transposed
Cme11g01808 Cme-Chr11:26267265 Cme05g02074 Cme-Chr5:28947038 3.20E-61 transposed
Cme02g00304 Cme-Chr2:2513471 Cme05g02074 Cme-Chr5:28947038 3.08E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64918 PF07714 PK_Tyr_Ser-Thr 3.20E-47 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme05g02074 - - csv:101209441 759.214