Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00165 ATGGCATCAAATTTGGGAGGGGCATCGATATCACAAACAGATGATTTCGAGACGTTCACACCAACGACTGATGTTGAGCCTCTAAAGAGGGCTTGGCGTAATGAAAAGGCTGCTCCTGAGATTCTACCCTATGAGGCATCTTTGGTTGGGAGAATCAAAGAGCAGATCCAAGCAATGTTCTTCAATTGTGTGGTCCATTTTCTTTATTTATTGATTACTAATATTGATACCAGTTGCATCCATTCACAGGAAGATTCTATAGAGGAATATTCAAGAAGTGGCATCGATCCCCTCATTGTATCACTCTATCAAATGGATTTAGATAGGATACAGTTCTTGTTGAGATCATATATTAGGAGTCGCTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGACGAACTTTTCAGACGTCTTTCTAAAGAAGAGATAACATTTACTGATAGGTGTCGCCATGATATGAAGAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACGTTTTGAAGCAATCTATTACAAGTGAAGAGGACGACATGGTTCCAGAACCTCCATTGGACACGTTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACACATACAGCTTGAGGATGAGGAAGAGAGAGCGTCAAGTAGAATAGAGGAGCCTTTTGAGATGGAGGCCAATGTATTGCACATTATTCGCTACAGGCCCATAAAATCACTTGTGATGGAGACTATTGCATTGGTAGCTTGGATGCTAATTTCAACATTGGTTGAGGCTCATAAATGA 798 39.6 MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAMFFNCVVHFLYLLITNIDTSCIHSQEDSIEEYSRSGIDPLIVSLYQMDLDRIQFLLRSYIRSRLQKIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDVLKQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVMETIALVAWMLISTLVEAHK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1005602 1011344 - MELO3C006096.2.1 Cme06g00165 329314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00165 265 MobiDBLite consensus disorder prediction 1 20 - -
Cme06g00165 265 PANTHER SLD5 PROTEIN 10 247 IPR008591 GO:0006261
Cme06g00165 265 MobiDBLite consensus disorder prediction 1 21 - -
Cme06g00165 265 CDD GINS_A_Sld5 24 166 IPR038749 -
Cme06g00165 265 Gene3D - 11 243 - -
Cme06g00165 265 Pfam GINS complex protein 99 147 IPR021151 -
Cme06g00165 265 Pfam DNA replication complex GINS protein SLD5 C-terminus 192 247 IPR031633 -
Cme06g00165 265 PIRSF GINS_Sld5 1 252 IPR008591 GO:0006261
Cme06g00165 265 SUPERFAMILY GINS helical bundle-like 20 177 IPR036224 -
Cme06g00165 265 SUPERFAMILY PriA/YqbF domain 194 247 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00165 K10735 - csv:101210888 413.305