Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00241 ATGGAAGTGAATTTCAATATCATCACCTTCTTCACCGTCGTTCTCTGCCTCTTCTTCCTCTCCTTCTTCATTCTCTTCCTCAAAACCCTAGCTGGAAAGTCCATAACCAACTCCGACTACTCGCCGGTGTACGGCACCATCTACGGCCAGGCTTTCTACTTAAACAACCTGTACGATCATCTGACGGCGGTGGCGAAGCGGCACAGAACCTTCCGACTGCTCGGAGAGTCGTACAGCGAGATATATACAGTGGATCCGAGAAACGTGGAGCATATATTGAAGACGAAATTCGAGAATTATATGAAAGGAAGGAAGGATCAAGAAGTGTGTGGGGATTTGTTCGGAGAAGGAATATTTGCGGTGGATGGAGAAAAGTGGAAGGAGCAGAGGAAATTGGCTAGCTATGAATTCTCGACGAAGATTCTTAGGGATTTTAGTTGCTCTGTTTTTAGAAGAAATGCTGAAAAACTCGTCGGAATTGTTTCGGAGTTCTCCACCATGGCTCGAATCTTCGATGTCCAGGATCTTCTAATGCGATGCTCTTTGGACTCCATTTTCAAAGTTGGGTTCGGCGTCGATTTGAATTGCATGGAGGAACCAAGCAAAGCTGCAGGCAGGGGCGGGTTCATGGAGGCTTTCGATGATGCTAGCGCTCAGGTTTTTTGGCGCTACATTGATCCTTTCTGGAAATTGAAAAGATTTCTCAACATCGGTTCCGAAGCTTCGTTTAGGAACAACCTCAAAATAATCGATGCTTTTGTGCATCAGTTGATCAGTGCTAGGAGAAAATTGCTTCACCAACCAAATCTTAAGATAGACAAAGAGGACATACTTTCGAGGTTTCTGATGGAAAGTGAGAAGGATCCAACAAGAATGAATGATCAATATCTAAGAGATATAATCCTGAATTTCATGTTGGCTGGCAGGGATACAAGTGCAGGAACTCTATCTTGGTTCTTCTATATGCTATGCAAGAACCCTTTAATACAGGAAAAAGTTGCTGAAGAAGTGAGCCAAATTGTTGGGGTTCAAGGGGAAGAAACTGACATAAATTTGTTCGTACAAAACTTAACTGATTCAGCTCTTGATAAAATGCACTATCTTCATGCAGCATTGACAGAGACTCTAAGGCTCTATCCTGCAGTCCCTATTGATGGAAGGACTGCTGAAACAGATGACATTCTTCCTGATGGCTATAAACTAAGAAAAGGAGATGGAGTATACTACTTGGCCTATTCCATGGGCAGAATGCCTTGCCTTTGGGGAGAAGATGCTGAAGATTTTAAACCTGAGAGATGGCTCGAAAATGGAACTTTTCGACCCGAATCACCTTTCAAATTCATCTCATTTCATGCGGGTCCTCGAATGTGTTTGGGAAAGGACTTTGCTTATCGACAAATGAAGATAGTATCTGCTGCACTGCTTCAATTTTTTCGATTCAAGCTAGCCGATCCAACGAGGAATGTAACTTATAGGATCATGCTTACCCTTCACATAGATGGAGGTCTCCCACTTCTTGCACTCCCAAGAGTAAGAAAATTTACCTAA 1548 43.09 MEVNFNIITFFTVVLCLFFLSFFILFLKTLAGKSITNSDYSPVYGTIYGQAFYLNNLYDHLTAVAKRHRTFRLLGESYSEIYTVDPRNVEHILKTKFENYMKGRKDQEVCGDLFGEGIFAVDGEKWKEQRKLASYEFSTKILRDFSCSVFRRNAEKLVGIVSEFSTMARIFDVQDLLMRCSLDSIFKVGFGVDLNCMEEPSKAAGRGGFMEAFDDASAQVFWRYIDPFWKLKRFLNIGSEASFRNNLKIIDAFVHQLISARRKLLHQPNLKIDKEDILSRFLMESEKDPTRMNDQYLRDIILNFMLAGRDTSAGTLSWFFYMLCKNPLIQEKVAEEVSQIVGVQGEETDINLFVQNLTDSALDKMHYLHAALTETLRLYPAVPIDGRTAETDDILPDGYKLRKGDGVYYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFISFHAGPRMCLGKDFAYRQMKIVSAALLQFFRFKLADPTRNVTYRIMLTLHIDGGLPLLALPRVRKFT 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1447405 1451878 + MELO3C006172.2.1 Cme06g00241 329390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00241 515 Gene3D Cytochrome P450 46 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Cme06g00241 515 PANTHER CYTOCHROME P450 6 512 - -
Cme06g00241 515 SUPERFAMILY Cytochrome P450 44 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 Pfam Cytochrome P450 54 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00241 515 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 6 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00241 Cme-Chr6:1447405 Cme01g02420 Cme-Chr1:32482869 5.05E-112 dispersed
Cme06g00237 Cme-Chr6:1406120 Cme06g00241 Cme-Chr6:1447405 2.24E-172 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00241 - - csv:101210732 975.311