Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00244 ATGGAGACCAATCCCGCCGCCTCCGCCGTCATCGTTAGCAATACTCCAGCCATCCCGCCGGAGAAACGTAACCGTTCCATCTTCGACGTTCCGGCCGACTTCTTCGATTCCTGCAAACTCCTTCGTTCTCCACACTCATACACATCACCAACCAGCGGCAGCAACAGGGACAGCCCAAGCGCTGAAAACACAGTCGATTCGGAGCAGAACTCTAGGGATTTCAAAGAAAGTTCCGTCGCCCACCGGTGGACCTGCAACATATGCAAGGCCGAGTTCGAGTCCCTCCTTGACCAGCGTTCGCACTTCAAATCCGACATTCACCGGTTCAATGTGAAACTAAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTTTGATGTGTCAAGTATTTCTGGATCAGAGGACGAAACAGAGAAAGAGAGAAATTCTCGGAATGAAGGGTATAAGGGTACCAGTGATAATGTGAACAAGAAGAGGTTGTTTGTTCATCTTCAAACAGGCGAAAGAGCTTCGGTATGGAAGTGTTTGATCATAAACGAGTCAGACAATATTTTGTATGAAGAAGATAAAACATCAGCCAGTGGTAGTGGCGTTCATGCACAGTGCCTTAGAGAGAGTGATGTTGTAGCAAGACTGAAATATTTAAACCATGAACCAAGAGATGGCTCCCATTTGCGGATAGTGTTGCTTGCTAGTGGTGGGCACTTCGCGGGCTGTGTATTCGATGGGAACTCGGTTGTAGCTCATAAAACCTTTCACAGATACGTGGTGAGAGCCAAGTCTGGAAAGAAACAGTCATCAAAAGATGCAAGTGGCAAATCAATCAGTTCTGCGGGGGCTTCACTTCGTCGTCATAATGAGCTGGCATTGAAGAAGGAAATTCAAGATCTCCTTGCTGCTTGGAAGTCCTACTTTAATGCTTCATCTTGCGTTTATATTTATGCTCCTTCAAACAATCGACAATTGCTTTTTAATGGAGATAAGCCATACTTTAGTGATCAGCACTCTGCCATTCGAAATATTCCTTTGACTGTTCGAAGGCCTACATTGAAAGAAGCTCAGCGTATTTATGAACAATTGGTGCAAGTAGTGTATGAAGTAGATGAGAAGGAAATATTGTCCACCAGTGAGCACAATGCACTGTTGAGTGCAACTGCAGATATAGCAGAAAATGGCACCCAAGATATAAGTGGTCAGAAAGTCATTGGAGATTTCGAAAAGGATGCTTGTACTCATCTTGAAGAATCTGTTGAACACCCAAAAAGTAGCGACAGTGAAAGTGAAGTTATTTGTAGAACTACACCTTTGCATGAAGCATCACAGTCTGGAAATGCAGATAGGGTTTTGGAACTGCTTGAACAGGGTTTTGATCCTTGCATTAAAGACGAAAGAGGACGTACTCCTTACATGCTAGCAAGTGAGAAGGAAGTCCGGAATAACTTTAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGACTGGGATGCTGCTAAGGTGCCCAGTGCATTAACCAAGGAAATGGAGGAATCTCAAGCAGCTAAGCAGGCAGAAAAAGACGCCAAACGAAAGGCAAGAGCAAAGGAGTTGAAAAAATTGAAGAAAGAAAAGGCCAAAAAAGCACAGGCCGCCCAGGATGCTGAAGCTCAGAAGGCTGCGAAGACGGAACAGAGTAGAGGAATCGGCTCTATTTTGAATTCTCGGGCTGAATCAACTAGTGGAAAACTGATTACCAAAGAGATGGCATTGGCTGCTGAACGGGAAAAGAGAGCAGCAGCTGCTGAGAGAAGGATGGCAGCCATGGCTGCAGCTGCAGCCACCAACAATTCCTCGTCAACTACTTCTAACAACAGCTCACAGACTAAAAGTGGATCAGCAGGGGATGCCAACTGCTCTTGCTGCGGTACTTCGCTGGCCGGTAAAGTTCCTTTCCACCGGTACAACTACAAATATTGCAGCTCGACTTGCATGCATGTACACAAAGAGGTCCTTGATGAAAACTAG 2037 45.31 METNPAASAVIVSNTPAIPPEKRNRSIFDVPADFFDSCKLLRSPHSYTSPTSGSNRDSPSAENTVDSEQNSRDFKESSVAHRWTCNICKAEFESLLDQRSHFKSDIHRFNVKLSIAGKNIVKEDDFDELTSDSFRDFDVSSISGSEDETEKERNSRNEGYKGTSDNVNKKRLFVHLQTGERASVWKCLIINESDNILYEEDKTSASGSGVHAQCLRESDVVARLKYLNHEPRDGSHLRIVLLASGGHFAGCVFDGNSVVAHKTFHRYVVRAKSGKKQSSKDASGKSISSAGASLRRHNELALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSDQHSAIRNIPLTVRRPTLKEAQRIYEQLVQVVYEVDEKEILSTSEHNALLSATADIAENGTQDISGQKVIGDFEKDACTHLEESVEHPKSSDSESEVICRTTPLHEASQSGNADRVLELLEQGFDPCIKDERGRTPYMLASEKEVRNNFRRFMASNLDKWDWDAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAAQDAEAQKAAKTEQSRGIGSILNSRAESTSGKLITKEMALAAEREKRAAAAERRMAAMAAAAATNNSSSTTSNNSSQTKSGSAGDANCSCCGTSLAGKVPFHRYNYKYCSSTCMHVHKEVLDEN 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1462799 1468008 + MELO3C006175.2.1 Cme06g00244 329393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00244 678 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 21 674 - -
Cme06g00244 678 MobiDBLite consensus disorder prediction 46 73 - -
Cme06g00244 678 ProSitePatterns Zinc finger C2H2 type domain signature. 85 107 IPR013087 -
Cme06g00244 678 MobiDBLite consensus disorder prediction 613 637 - -
Cme06g00244 678 MobiDBLite consensus disorder prediction 141 163 - -
Cme06g00244 678 MobiDBLite consensus disorder prediction 522 536 - -
Cme06g00244 678 Gene3D - 391 509 IPR036770 -
Cme06g00244 678 MobiDBLite consensus disorder prediction 46 67 - -
Cme06g00244 678 SUPERFAMILY beta-beta-alpha zinc fingers 75 114 IPR036236 -
Cme06g00244 678 Pfam Bacteroidetes VLRF1 release factor 239 375 IPR041175 -
Cme06g00244 678 SUPERFAMILY Ankyrin repeat 445 498 IPR036770 -
Cme06g00244 678 MobiDBLite consensus disorder prediction 517 536 - -
Cme06g00244 678 MobiDBLite consensus disorder prediction 543 578 - -
Cme06g00244 678 ProSiteProfiles Ankyrin repeat profile. 443 475 IPR002110 GO:0005515
Cme06g00244 678 MobiDBLite consensus disorder prediction 615 637 - -
Cme06g00244 678 Coils Coil 519 564 - -
Cme06g00244 678 Pfam Vms1-associating treble clef domain 641 673 IPR041540 -
Cme06g00244 678 MobiDBLite consensus disorder prediction 140 163 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00244 K26089 - csv:101216211 1134.78