Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g00250 | ATGGATCGAGCCACCACCGCGCATGGCCGTCCACTTCCACCGCCATTTATTTCAAGAGATTTCCATCTCAATCCCCACCATCATTTCCTCCACCAAAATCCCGACCAACAATACAACGAAAACGGTAGCTCCGGCAGCGGCGGAGGAGACGGCGAGGTTTTGAAACGGCCACGCGGCCGGCCCGCCGGGTCGAAGAACAAGCCGAAGCCGCCGACGATAATCACACGGGATAGTGCCAACGCACTCCGATGCCACGTCATCGAAATCGCCAACGCTAACGACGTGATTGAAACCCTCACCATTTTCGCACGTCAACGCCAGCGTGGTATTTGTGTCCTGACCGGCGCCGGAGCGGTCACCAACGTCACACTCAAGCAGCCTGTCTCCACCGCCGGAGCGGTGATATCCCTGCCGGGAAGATTCGAGATTCTGTCGTTGTCGGGATCGTTTCTGCCGCCGCCAGCGCCAGCGGCCGCATCTGGGCTGACCGTGTATTTGTCCGGCGGGCAAGGGCAAGTTGTAGGAGGAAGCGTGGTGGGCCCACTTTTGAGTTCGGGGCCGGTGGTGATTACGGCTGCTTCATTCGGAAACGCAGCGTACGAGAGATTGCCGGTGGAGGATGACGACGTGGAAGCGGCGAATGCCGGAAGTAGTCCGATTAGGTCCCCGGAAAACGCCGTGCAACAGCAACAATTTTTGCCGGAATTTCATGGACTGGCGCCGAATCTAATGAACACGTGTCAATTGCCGACGGAACCCTACTGGGGCACAGGTCGTACTCCGCCATTTTAG | 792 | 58.21 | MDRATTAHGRPLPPPFISRDFHLNPHHHFLHQNPDQQYNENGSSGSGGGDGEVLKRPRGRPAGSKNKPKPPTIITRDSANALRCHVIEIANANDVIETLTIFARQRQRGICVLTGAGAVTNVTLKQPVSTAGAVISLPGRFEILSLSGSFLPPPAPAAASGLTVYLSGGQGQVVGGSVVGPLLSSGPVVITAASFGNAAYERLPVEDDDVEAANAGSSPIRSPENAVQQQQFLPEFHGLAPNLMNTCQLPTEPYWGTGRTPPF | 263 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1512743 | 1513534 | - | MELO3C000307.2.1 | Cme06g00250 | 329399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g00250 | 263 | MobiDBLite | consensus disorder prediction | 30 | 46 | - | - | |
Cme06g00250 | 263 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 83 | 196 | IPR005175 | - | |
Cme06g00250 | 263 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 | 34 | 263 | - | - | |
Cme06g00250 | 263 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
Cme06g00250 | 263 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 79 | 209 | - | - | |
Cme06g00250 | 263 | Gene3D | - | 82 | 214 | - | - | |
Cme06g00250 | 263 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 34 | 263 | IPR014476 | GO:0003680 | |
Cme06g00250 | 263 | ProSiteProfiles | PPC domain profile profile. | 79 | 216 | IPR005175 | - | |
Cme06g00250 | 263 | CDD | DUF296 | 83 | 151 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g00250 | Cme-Chr6:1512743 | Cme10g00915 | Cme-Chr10:6686355 | 6.40E-62 | dispersed | |
Cme11g02522 | Cme-Chr11:31705602 | Cme06g00250 | Cme-Chr6:1512743 | 1.28E-81 | wgd | |
Cme06g00250 | Cme-Chr6:1512743 | Cme09g01678 | Cme-Chr9:21490222 | 1.06E-71 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g00250 | - | - | csv:101212439 | 481.1 |