Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g00253 | ATGAGCTCGAGGCGGAGCAGTGGAAGTTGCACAAAAGGCAAGGGTGGTGGCAGCAACGGCAGTGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGGAGGAAGTGTACGCCAGAGTGTATATTTGCACCCTACTTTGACTCAGAACAAGGTACAACTCATTTTGCAGCCGTACACAAAGTGTTTGGTGCAAGCAATGTGTCGAAGATGCTTCTACATATTCCTGAACATAAACGGCTTGACGCAGCTATAACTATATGTTACGAGGCACAAGCTCGAGTCAGAGAGCCAGTTCTCGGCTGTGTTGCTCATATTTTTGCCCTTCAACAACAGGCTGCAAGGTTGCAAATAGAGATCTCATATTTGCAAGGGTACCTAGCAACATCTGAGCTTCCAAGACCCGCACCCCATCTTCAGGCACAACCACCAGCTCTAGTCAAGAAGCCAACTCTATCCTCAATTGTAAGCCTTCCATCAGATTGCCCTTCATTTCCGGCTGAATCAGATCTTTCTCTACTTCTTGATCCTGTCGAGCAAGCTTCACAGGAAAAATTGCAGTCTCCATTGGAGTCGTACCAAATTGGAAGCAACAATTTCCCATCCATGGTCAGCATTGATCAACAAGTTGTCCAAAAACAACTGTCTTCGATGCAGCGCATTGGTGCCTCGCTATTTCCAAACGTCCCTAAACGATCTTAA | 696 | 47.41 | MSSRRSSGSCTKGKGGGSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQAARLQIEISYLQGYLATSELPRPAPHLQAQPPALVKKPTLSSIVSLPSDCPSFPAESDLSLLLDPVEQASQEKLQSPLESYQIGSNNFPSMVSIDQQVVQKQLSSMQRIGASLFPNVPKRS | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1538026 | 1539410 | - | MELO3C006183.2.1 | Cme06g00253 | 329402 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g00253 | 231 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Cme06g00253 | 231 | ProSiteProfiles | LOB domain profile. | 23 | 125 | IPR004883 | - | |
Cme06g00253 | 231 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 215 | - | - | |
Cme06g00253 | 231 | Pfam | Lateral organ boundaries (LOB) domain | 24 | 121 | IPR004883 | - | |
Cme06g00253 | 231 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 18 | 1 | 215 | - | - | |
Cme06g00253 | 231 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme06g00253 | Cme11g02516 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g02065 | Cme-Chr4:28030339 | Cme06g00253 | Cme-Chr6:1538026 | 2.93E-45 | dispersed | |
Cme06g00253 | Cme-Chr6:1538026 | Cme11g02517 | Cme-Chr11:31682796 | 1.40E-49 | dispersed | |
Cme01g01658 | Cme-Chr1:22716328 | Cme06g00253 | Cme-Chr6:1538026 | 1.23E-41 | transposed | |
Cme04g01566 | Cme-Chr4:22964703 | Cme06g00253 | Cme-Chr6:1538026 | 4.55E-49 | transposed | |
Cme10g00914 | Cme-Chr10:6680852 | Cme06g00253 | Cme-Chr6:1538026 | 4.55E-45 | transposed | |
Cme11g02518 | Cme-Chr11:31685370 | Cme06g00253 | Cme-Chr6:1538026 | 4.23E-07 | transposed | |
Cme11g02516 | Cme-Chr11:31667442 | Cme06g00253 | Cme-Chr6:1538026 | 1.74E-50 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41422 | PF03195 | LOB | 7.80E-37 | No_clan | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g00253 | K21994 | - | csv:101216934 | 407.912 |