Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00256 ATGGAAGAGAGAGAAGCTATAAATGCAGGAGTAACAGTGATAGGAGCCGAAGCTCCGTCGGCTTATCATGTGGCTCCGAGAACCGATAACCCGCCGCCGGCAGGCGGCGGCGGTTCACCAACAGTCGCCGCCTCGCCAGTAAGCGTGGGGCTACCCGGAAGTGGAACCACAGGGAAAAAGAAGCGGGGTAGACCTAGAAAATACGGTCCAGATGGAACGGTAACGATGGCATTGTCGCCATTGCCGCTTTCTTCCTCGGCTCCGGCAGCCGGTGGCTTCTCCATTACTAAGCGGGGGAAGGGCCGGCTCGGTGGCTCGGAATTCAAGCATCACAAGAAAATGGGAATGGAATATATAGGAGAATGGAATGCGTGTTCAGTCGGGACAAATTTCATGCCTCATATCATCACGGTCAATGCTGGCGAGGACGTCACTATGAAGATCATATCATTTTCCCAACAAGGTCCTCGAGCAATCTGTATTCTTTCTGCCAACGGAGTAATTTCTAATGTTACTCTTCGGCAGCCTGATTCTTCGGGTGGTACTTTAACATATGAGGGTCGTTTCGAGATACTTTCTTTGTCTGGATCATTCATGCCCACTGAAAATCAAGGAACAAGAAGCAGGTCGGGTGGGATGAGCGTCTCCTTGGCAAGCCCCGACGGTCGTGTTGTTGGGGGAGGGGTAGCTGGTTTACTCATAGCTGCAAGCCCAGTTCAGGTTGTAGTAGGGAGTTTCCTACCAACTAGCCAACAGGAGCAGAAGGTAAAGAAGCAGAAGCCACCTGAGTCAGTACCAACTGCAGCCCCTGGTTCAGTCCCGAGCACGGCACCAGCCACCGCTATGCCTGCTTCCAATGCTGACACAGAGGACAATTTAAATGGGAATGGTGTGCAAAATCCCGGGTCATTAAAACCAGCTGGTTTTGCTCCTTCGCCTTTCCAAAGAGATAATTGGGGTACCAACGCTGCTGTGCATTCCTTGCAGGAGCCGAGAAATTCCGCTACCGACATCAATATATCGCTGCCAGGCTAA 1035 51.88 MEEREAINAGVTVIGAEAPSAYHVAPRTDNPPPAGGGGSPTVAASPVSVGLPGSGTTGKKKRGRPRKYGPDGTVTMALSPLPLSSSAPAAGGFSITKRGKGRLGGSEFKHHKKMGMEYIGEWNACSVGTNFMPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPTSQQEQKVKKQKPPESVPTAAPGSVPSTAPATAMPASNADTEDNLNGNGVQNPGSLKPAGFAPSPFQRDNWGTNAAVHSLQEPRNSATDINISLPG 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1564295 1569689 + MELO3C006186.2.1 Cme06g00256 329405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00256 344 MobiDBLite consensus disorder prediction 269 301 - -
Cme06g00256 344 MobiDBLite consensus disorder prediction 17 72 - -
Cme06g00256 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 343 IPR039605 GO:0003680
Cme06g00256 344 CDD DUF296 133 246 IPR005175 -
Cme06g00256 344 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 246 IPR005175 -
Cme06g00256 344 Gene3D - 133 261 - -
Cme06g00256 344 SUPERFAMILY AF0104/ALDC/Ptd012-like 131 253 - -
Cme06g00256 344 MobiDBLite consensus disorder prediction 250 344 - -
Cme06g00256 344 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 343 - -
Cme06g00256 344 ProSiteProfiles PPC domain profile profile. 128 271 IPR005175 -
Cme06g00256 344 MobiDBLite consensus disorder prediction 315 344 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00256 Cme-Chr6:1564295 Cme06g00921 Cme-Chr6:6454924 2.54E-93 dispersed
Cme06g00256 Cme-Chr6:1564295 Cme09g01675 Cme-Chr9:21436169 1.94E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00256 - - csv:101212918 591.267