Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g00256 | ATGGAAGAGAGAGAAGCTATAAATGCAGGAGTAACAGTGATAGGAGCCGAAGCTCCGTCGGCTTATCATGTGGCTCCGAGAACCGATAACCCGCCGCCGGCAGGCGGCGGCGGTTCACCAACAGTCGCCGCCTCGCCAGTAAGCGTGGGGCTACCCGGAAGTGGAACCACAGGGAAAAAGAAGCGGGGTAGACCTAGAAAATACGGTCCAGATGGAACGGTAACGATGGCATTGTCGCCATTGCCGCTTTCTTCCTCGGCTCCGGCAGCCGGTGGCTTCTCCATTACTAAGCGGGGGAAGGGCCGGCTCGGTGGCTCGGAATTCAAGCATCACAAGAAAATGGGAATGGAATATATAGGAGAATGGAATGCGTGTTCAGTCGGGACAAATTTCATGCCTCATATCATCACGGTCAATGCTGGCGAGGACGTCACTATGAAGATCATATCATTTTCCCAACAAGGTCCTCGAGCAATCTGTATTCTTTCTGCCAACGGAGTAATTTCTAATGTTACTCTTCGGCAGCCTGATTCTTCGGGTGGTACTTTAACATATGAGGGTCGTTTCGAGATACTTTCTTTGTCTGGATCATTCATGCCCACTGAAAATCAAGGAACAAGAAGCAGGTCGGGTGGGATGAGCGTCTCCTTGGCAAGCCCCGACGGTCGTGTTGTTGGGGGAGGGGTAGCTGGTTTACTCATAGCTGCAAGCCCAGTTCAGGTTGTAGTAGGGAGTTTCCTACCAACTAGCCAACAGGAGCAGAAGGTAAAGAAGCAGAAGCCACCTGAGTCAGTACCAACTGCAGCCCCTGGTTCAGTCCCGAGCACGGCACCAGCCACCGCTATGCCTGCTTCCAATGCTGACACAGAGGACAATTTAAATGGGAATGGTGTGCAAAATCCCGGGTCATTAAAACCAGCTGGTTTTGCTCCTTCGCCTTTCCAAAGAGATAATTGGGGTACCAACGCTGCTGTGCATTCCTTGCAGGAGCCGAGAAATTCCGCTACCGACATCAATATATCGCTGCCAGGCTAA | 1035 | 51.88 | MEEREAINAGVTVIGAEAPSAYHVAPRTDNPPPAGGGGSPTVAASPVSVGLPGSGTTGKKKRGRPRKYGPDGTVTMALSPLPLSSSAPAAGGFSITKRGKGRLGGSEFKHHKKMGMEYIGEWNACSVGTNFMPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPTSQQEQKVKKQKPPESVPTAAPGSVPSTAPATAMPASNADTEDNLNGNGVQNPGSLKPAGFAPSPFQRDNWGTNAAVHSLQEPRNSATDINISLPG | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1564295 | 1569689 | + | MELO3C006186.2.1 | Cme06g00256 | 329405 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g00256 | 344 | MobiDBLite | consensus disorder prediction | 269 | 301 | - | - | |
Cme06g00256 | 344 | MobiDBLite | consensus disorder prediction | 17 | 72 | - | - | |
Cme06g00256 | 344 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 1 | 343 | IPR039605 | GO:0003680 | |
Cme06g00256 | 344 | CDD | DUF296 | 133 | 246 | IPR005175 | - | |
Cme06g00256 | 344 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 133 | 246 | IPR005175 | - | |
Cme06g00256 | 344 | Gene3D | - | 133 | 261 | - | - | |
Cme06g00256 | 344 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 131 | 253 | - | - | |
Cme06g00256 | 344 | MobiDBLite | consensus disorder prediction | 250 | 344 | - | - | |
Cme06g00256 | 344 | PANTHER | AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN | 1 | 343 | - | - | |
Cme06g00256 | 344 | ProSiteProfiles | PPC domain profile profile. | 128 | 271 | IPR005175 | - | |
Cme06g00256 | 344 | MobiDBLite | consensus disorder prediction | 315 | 344 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g00256 | Cme-Chr6:1564295 | Cme06g00921 | Cme-Chr6:6454924 | 2.54E-93 | dispersed | |
Cme06g00256 | Cme-Chr6:1564295 | Cme09g01675 | Cme-Chr9:21436169 | 1.94E-110 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g00256 | - | - | csv:101212918 | 591.267 |