Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00288 ACAAAAATCATCTCTTCAACTTCAAACCACACTTCGCCATTAAAGCCCTCTCTCTCTTTTTATCTCCAGATCTTTCATTCTTCCCTTTTAACCTCCATTAAAATGCTCTCTTCACATCTAATACCTTCGAAAAACCCTCTTTCCACCAACCCCACTTCCCCTTTTTCCCCATTATACCCAAATCTCCTCTCAACCGTCCGATCGAAATTCCCCTATCGCCCCCATATCGCCACCTTCGCCTCCGTTCATGGCGTCTCTTCAAAACCCACCTCCCAGACTCTCAATCCAATCCTCAAACCGAGGCAATTCTGCAAAAATCCTGTAAACCCATTTGGGTGTCTTCCTTCCAAGTCTAACTCCCATGTCCCCGCTGCCGCTGCCGCAGATGGCGGCGATACCACCGCTGATTCCGCCCCCAACAGCAAAAAATTTCAGCTAGCCATCGTCTTTGGGCTCTGGTATTTTCAGAACATCGTCTTCAATATCTATAACAAGAAGGTTCTTAACATTTTCCCTTTCCCATGGCTTCTCGCTTCGTTTCAACTCTTCGCTGGATCTGTTTGGATGCTTGTTCTCTGGTCCTTTAAGCTTCAGCCATGTCCTAAAATCTCCAAGCCCTTTCTAATCGCTCTCCTCGGCCCTGCTTTATTTCACACAATCGGCCATATCTCCGCTTGTGTTTCGTTCTCTAAAGTCGCTGTTTCTTTCACTCATGTCATTAAATCGGCCGAACCAGTGTTCTCGGTTCTGTTCTCCTCGTTCCTCGGCGATTCGTACCCAATCCAGGTCTGGCTCTCGATTCTCCCCATTGTTTTTGGTTGCTCTCTAGCTGCCATTACTGAAGCTACCTTCAATTTCGAAGGTCTCTCAGGCGCTATGATCAGTAATGTAGGGTTTGTATTAAGAAACATTTACTCTAAAAGGAGCTTGCAGAACTTCAAAGAGGTTAATGGGTTGAATTTATATGGTTGGATTAGTATAATTTCTTTGTTGTATCTGTTTCCTGTGGCCATTTTCGTTGAAGGGTCAAAATGGGTTCAGGGATATCATCAAGCAATTGCTTCCATTGGAAATGCTTCAACATTATATATCTGGGTCTTGATTTCTGGAATCTTTTATCATCTTTATAATCAATCTTCTTACCAAGCTTTAGATGAAATCAGTCCTTTGACATTCTCTGTTGGTAATACAATGAAGAGAGTGGTTGTGATTGTGGCTTCTGTGTTGGTTTTTAGAAATCCAGTTAGGCCTTTGAATGCTGTTGGTTCTGCCATTGCCATTTTTGGGACTTTTCTGTATTCTCAGGCAACAAGTAAAAAGAGTTCTAAGAAGATTGAGGAAGGTGAAGAAAAGAAGGATTGA 1362 43.1 TKIISSTSNHTSPLKPSLSFYLQIFHSSLLTSIKMLSSHLIPSKNPLSTNPTSPFSPLYPNLLSTVRSKFPYRPHIATFASVHGVSSKPTSQTLNPILKPRQFCKNPVNPFGCLPSKSNSHVPAAAAADGGDTTADSAPNSKKFQLAIVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFAGSVWMLVLWSFKLQPCPKISKPFLIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVLFSSFLGDSYPIQVWLSILPIVFGCSLAAITEATFNFEGLSGAMISNVGFVLRNIYSKRSLQNFKEVNGLNLYGWISIISLLYLFPVAIFVEGSKWVQGYHQAIASIGNASTLYIWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVASVLVFRNPVRPLNAVGSAIAIFGTFLYSQATSKKSSKKIEEGEEKKD 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1759389 1761021 - MELO3C006217.2.1 Cme06g00288 329437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00288 453 SUPERFAMILY Multidrug resistance efflux transporter EmrE 324 436 - -
Cme06g00288 453 PANTHER SOLUTE CARRIER FAMILY 35 109 447 - -
Cme06g00288 453 Pfam Triose-phosphate Transporter family 145 434 IPR004853 -
Cme06g00288 453 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 145 444 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cme06g00288 453 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 109 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00288 Cme-Chr6:1759389 Cme06g02272 Cme-Chr6:29779107 1.72E-99 dispersed
Cme06g00288 Cme-Chr6:1759389 Cme12g01691 Cme-Chr12:23801716 6.96E-72 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00288 K15283 - csv:101219051 765.763