Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00291 ATGGAGGAAGAGCTGAAGCTGTTCAGAACATGGTCGAGTCCATTCCCTCTAAGAATAGTATGGGCACTGAAATTGAAAGGGATAGAATACGACACCGTTTACGAAGATCTGGCCAACAAGAGTCCATTGCTTTTGGAGTACAATCCCATTTACAAGAAGGTTCCTGTGCTCGTCCATGGCGGAAAGCCGATCGCCGAATCGCTCGTTATTCTCGAATACATTGAAGAAACATGGAAGCAGAATCCATTGCTGCCTCAGGATCCTTACCAGAGAGCTGTTGCTCGCTTTTGGGCTAAATTTGGGGATGACAAGGTTTTGGAATCTATAAAGAAAGTGTTTATGAACCAAGGAAAAGTGAGAGAGGAAGGTGTGGAAGAAGCCTTGGAGAATTTGAAGCATTTGGAAGAAGAGTTAAAAGGAAAGAGGTTCTTTGGAGGGGAGGCCATTGGGTTTGTGGATATTGCAGTGGGGTGGCTTGCAAACTTAGTTAGTGTAATAGAGGAAGTTGTTGGACTTGAATTGATAACTGAAGAAAGGTTTCCCCTCTTATCCAAATGGACAAAGGAATTTGCTGCTGCTCCAATCATCAATGAAAACTGGCCACCTAGAGACAAGCTTATCGCTAAGTACCAAGCATTGCATCAAACTTTTATGAGTAAACAAGAATAG 669 43.05 MEEELKLFRTWSSPFPLRIVWALKLKGIEYDTVYEDLANKSPLLLEYNPIYKKVPVLVHGGKPIAESLVILEYIEETWKQNPLLPQDPYQRAVARFWAKFGDDKVLESIKKVFMNQGKVREEGVEEALENLKHLEEELKGKRFFGGEAIGFVDIAVGWLANLVSVIEEVVGLELITEERFPLLSKWTKEFAAAPIINENWPPRDKLIAKYQALHQTFMSKQE 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1771246 1773866 - MELO3C006220.2.1 Cme06g00291 329440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00291 222 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Cme06g00291 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cme06g00291 222 Gene3D Glutaredoxin 1 83 - -
Cme06g00291 222 CDD GST_N_Tau 5 78 - -
Cme06g00291 222 Gene3D - 84 221 - -
Cme06g00291 222 SFLD Glutathione Transferase (cytosolic) 2 221 IPR040079 -
Cme06g00291 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 215 IPR045073 -
Cme06g00291 222 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
Cme06g00291 222 PANTHER S-TRANSFERASE, PUTATIVE-RELATED 1 215 - -
Cme06g00291 222 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Cme06g00291 222 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Cme06g00291 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 211 IPR010987 -
Cme06g00291 222 Pfam Glutathione S-transferase, C-terminal domain 118 194 IPR004046 -
Cme06g00291 222 Coils Coil 121 141 - -
Cme06g00291 222 CDD GST_C_Tau 88 213 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01703 Cme-Chr2:24094306 Cme06g00291 Cme-Chr6:1771246 1.51E-73 dispersed
Cme06g00291 Cme-Chr6:1771246 Cme08g02475 Cme-Chr8:31679337 7.59E-74 dispersed
Cme06g00431 Cme-Chr6:2726324 Cme06g00291 Cme-Chr6:1771246 4.42E-12 dispersed
Cme08g02476 Cme-Chr8:31681575 Cme06g00291 Cme-Chr6:1771246 1.01E-67 dispersed
Cme08g02477 Cme-Chr8:31683009 Cme06g00291 Cme-Chr6:1771246 1.58E-67 dispersed
Cme10g00419 Cme-Chr10:2647426 Cme06g00291 Cme-Chr6:1771246 2.07E-52 dispersed
Cme06g00291 Cme-Chr6:1771246 Cme06g00292 Cme-Chr6:1776272 9.18E-80 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00291 K00799 - csv:101219529 424.091