Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00302 ATGGCGGGATTAGACTTGGGCTCTGCTTCTCACTTTGTTCATCAACTTCAGCACCGTTCTGTCGATCTTCACCTCCAACATCCGACCGATGTAGACGACGGTTCCGACCACCAACCTAACTCCGGCGGCGAAATCGTTGCCCGACGGTCCAGAGGTCGACCGCCCGGTTCTAAGAATAAACCCAAACCACCGGTTATTATTACCAGGGAAAGCGCTAACACTCTTCGAGCCCACATCTTGGAAGTCAACACCGGTTGTGATGTCTTTGACTCCGTCGCCGCTTATGCCCGGAAACGCCAGCGTGGCGTCTGCATCTTGAGCGGCACCGGCACCGTCACTAACGTTACCTTACGGCAACCTTCATCAACCTCTATTACTCTTCCTGGAAGGTATGAGATATTATCTTTAACGGGATCGTTTTTACCGCCACCGGCACCTCCGGGAGCTACGAGTTTGACTATCTTCCTTGCGGGTGGGCAAGGGCAAATCATCGGAGGGAATGTTGTCGGGTCTTTGATTGCTTCGGGACCGGTGATTGTCATTGCCTCGTCGTTTACCAATGTTGCTTACGAGAGGTTACCATTGGACGAGGAGGAACAACCGTCCAACGGTGGTGGTGGTGGCAGTCTTAGCAACCCGTTTCCGGACCCGTCGGTCGGGTTGCCGTTGTTTAATATGCCGTCGAACATGGCGGGGAATCAAAATCAGCTGGCGGTGGACGGATGGGGCGGAGGGAATTCCGGTGGGAGAGCATCTTATTGA 762 53.94 MAGLDLGSASHFVHQLQHRSVDLHLQHPTDVDDGSDHQPNSGGEIVARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVAAYARKRQRGVCILSGTGTVTNVTLRQPSSTSITLPGRYEILSLTGSFLPPPAPPGATSLTIFLAGGQGQIIGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEQPSNGGGGGSLSNPFPDPSVGLPLFNMPSNMAGNQNQLAVDGWGGGNSGGRASY 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1851064 1852153 + MELO3C006230.2.1 Cme06g00302 329451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00302 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 253 - -
Cme06g00302 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 199 - -
Cme06g00302 253 MobiDBLite consensus disorder prediction 26 65 - -
Cme06g00302 253 ProSiteProfiles PPC domain profile profile. 72 206 IPR005175 -
Cme06g00302 253 CDD DUF296 76 185 IPR005175 -
Cme06g00302 253 Gene3D - 75 201 - -
Cme06g00302 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 253 IPR014476 GO:0003680
Cme06g00302 253 MobiDBLite consensus disorder prediction 197 222 - -
Cme06g00302 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 187 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00302 Cme-Chr6:1851064 Cme06g00517 Cme-Chr6:3249890 7.15E-64 dispersed
Cme11g02481 Cme-Chr11:31446850 Cme06g00302 Cme-Chr6:1851064 1.90E-103 wgd
Cme04g00106 Cme-Chr4:850979 Cme06g00302 Cme-Chr6:1851064 6.63E-95 wgd
Cme06g00302 Cme-Chr6:1851064 Cme06g02479 Cme-Chr6:31767235 1.51E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00302 - - csv:101220959 434.491