Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00309 ATGATGGAGGTGAGTTGGGGAACGGCTGCGGCGGTGACGGTAGTGGCGGGTGCGGCGGCGGTGTTCTTTGCGGTGGTGAAATGGGCGGCGAAGAGTTTCAACGAGTGGATTTATGAAGCGAAATTGGGGGAGCGGCGGATGGCTCTGCCGCCTGGGGATTTGGGATGGCCTTTAATTGGAAATATGTTGGGTTTTCTTAGAGCCTTCAAGTCTAAGAATCCTGAAACCTTCATTGATAGCTATGTTTCCAGGTTTGGGAAAATCGGAGTGTACAAAGTTCATTTGTTTGGAAATCCTAGCGTGGTCGTGACGACGCCGGAGACATGCCGGAAAGTTCTGACCGACGACGAAGCCTTCCAGCCCGGTTGGCCACGCGCAGCCGTAGAGCTCATTGGAAAGAAGTCATTCATTGAAATGCCGGTCGAGGAACACAAGCGCCTCCGCCGGTTAACCTCTGCTCCGGTGAACGGCTTCGAAGCTTTGAGCAACTACATTCCTTACATTGAAGAGAATGTATTAAAATCCTTGGATAAATGGTCGACTATGGGACCAATCGAATTCTTAACTCAACTTCGTAAGCTCACATTCACCATTATCATGTACATTTTCCTTAGCGCGGAGAGCGAATCGGTAATGGAATCGTTAGAGAAGGAGTATACTCGGCTTAACTATGGTGTTCGAGCCTTGAGAATTAACCTTCCTGGATTTGCTTACCACAAAGCACTCAAGGCTCGGAAGAATCTTGTGGCTGCGTTGCAAGGAATTGTGACGGAGCGAAGGAAGCGAAGATTGGGCAAATGGGCGCCGAAGAGGAAGGACATGATGGACGCTCTGATTGATGTTGAAGATGAAAATGGCAGAAAATTGACTGATGAGGAGATCATTGACATTCTGGTGATGTACTTGAATGCAGGTCATGAATCTTCCGGCCATACCATGATGTGGGCAACTATTTTGTTGAATCAACACCCAGAAGTTCTCAAGAAAGCCAAGGAGGAACAGGAGGAGATTGTGAGAAGGAGGCCTCCAGGTCAAAAGGGATTGACGTTGAAAGAATGCAGGGAAATGGAATATCTTTCGAAAGTGGTCGATGAAACTCTTCGCTATGTATCATTCTCCCTTGTTGTCTTCAGAGAAGCACAAATGGATGTCAATCTTAATGGCTATCTAATTCCCAAGGGTTGGAAAGTGCTGGCTTGGTTCAGAAGCATTCACTATGACGATGAAGTTTACCCAGACCCAAAAAAATTTGATCCTTCAAGATGGGATGGATTTATCCCAAAAGCAGGAGAGTTTCTTCCATTTGGAGCAGGAAGCAGGCTGTGCCCAGGAAATGATCTAGCCAAATTGGAGATTTGTATTTTCATTCACTATTTTCTCCTCAATTACAAGCTTGAATGGCTGACCCCTGATTGTCCAATCTTGTATCTGCCCCATTCAAGGCCAAAGGACAATTGCTTGGCTAAAATCAGTAAGAATTCCAGCACTGTTGCGTGA 1497 46.56 MMEVSWGTAAAVTVVAGAAAVFFAVVKWAAKSFNEWIYEAKLGERRMALPPGDLGWPLIGNMLGFLRAFKSKNPETFIDSYVSRFGKIGVYKVHLFGNPSVVVTTPETCRKVLTDDEAFQPGWPRAAVELIGKKSFIEMPVEEHKRLRRLTSAPVNGFEALSNYIPYIEENVLKSLDKWSTMGPIEFLTQLRKLTFTIIMYIFLSAESESVMESLEKEYTRLNYGVRALRINLPGFAYHKALKARKNLVAALQGIVTERRKRRLGKWAPKRKDMMDALIDVEDENGRKLTDEEIIDILVMYLNAGHESSGHTMMWATILLNQHPEVLKKAKEEQEEIVRRRPPGQKGLTLKECREMEYLSKVVDETLRYVSFSLVVFREAQMDVNLNGYLIPKGWKVLAWFRSIHYDDEVYPDPKKFDPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEICIFIHYFLLNYKLEWLTPDCPILYLPHSRPKDNCLAKISKNSSTVA 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1881459 1886150 - MELO3C006237.2.1 Cme06g00309 329458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00309 498 Gene3D Cytochrome P450 40 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 PANTHER CYTOCHROME P450 26 20 486 - -
Cme06g00309 498 SUPERFAMILY Cytochrome P450 45 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 Pfam Cytochrome P450 50 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Cme06g00309 498 PANTHER ENT-KAURENOIC ACID OXIDASE 2 20 486 - -
Cme06g00309 498 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g00309 498 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00087 Cme-Chr4:718861 Cme06g00309 Cme-Chr6:1881459 1.33E-162 dispersed
Cme06g00309 Cme-Chr6:1881459 Cme06g02491 Cme-Chr6:31867290 2.84E-160 dispersed
Cme08g00146 Cme-Chr8:1060743 Cme06g00309 Cme-Chr6:1881459 3.47E-34 transposed
Cme11g02477 Cme-Chr11:31415720 Cme06g00309 Cme-Chr6:1881459 0 wgd
Cme06g00309 Cme-Chr6:1881459 Cme06g02490 Cme-Chr6:31861131 1.25E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00309 K04123 - csv:101221667 961.444