Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g00342 | AATGGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGCTCCAGGGGAACCCTTCCACTTTCTCCTTCTTCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCACCCTTCTCTCTCCGACCATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCAGCGATCTGCCGGCGGCTGGTTCCACCGAAGATGCCTTTGTCTCCGCCTGGAAGAAGGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATTCCTCCGAACTCTCGGCTAAAGAGGTTGACATGGTTATAATTCCAGCAACAACCGGACAAATGGGTGTTCTCCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCAGGGGTTTTATCAGTACACGAAGGGAGCGATATCAAAAAGTACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGAAACTCATACGCTGACATTATCGCTGTTGAAGCTGTGCCTGTAGATCAAATTGATGCTGCCCAAGTACAGAAGGGTCTCGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATCGGAGTTGACGTACACAGTGCTCTGAATTCTGCTCTTACCGGATAG | 735 | 50.2 | NGFGKSSIFSASKQLQGNPSTFSFFFFISLRPCESRATTLLSPTMFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG | 244 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2118663 | 2121279 | + | MELO3C006270.2.1 | Cme06g00342 | 329491 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g00342 | 244 | Gene3D | - | 201 | 243 | - | - | |
Cme06g00342 | 244 | Pfam | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | 114 | 185 | IPR020546 | GO:0015986 | |
Cme06g00342 | 244 | Gene3D | - | 102 | 200 | IPR036771 | - | |
Cme06g00342 | 244 | SUPERFAMILY | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 114 | 195 | IPR036771 | - | |
Cme06g00342 | 244 | Hamap | ATP synthase epsilon chain [atpC]. | 112 | 232 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Cme06g00342 | 244 | PANTHER | ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL | 45 | 244 | - | - | |
Cme06g00342 | 244 | Coils | Coil | 209 | 229 | - | - | |
Cme06g00342 | 244 | TIGRFAM | ATP_synt_epsi: ATP synthase F1, epsilon subunit | 117 | 229 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Cme06g00342 | 244 | PANTHER | ATP SYNTHASE DELTA/EPSILON CHAIN | 45 | 244 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Cme06g00342 | 244 | CDD | F1-ATPase_delta | 114 | 237 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g00342 | K02134 | - | csv:101206104 | 380.178 |