Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00342 AATGGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGCTCCAGGGGAACCCTTCCACTTTCTCCTTCTTCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCACCCTTCTCTCTCCGACCATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCAGCGATCTGCCGGCGGCTGGTTCCACCGAAGATGCCTTTGTCTCCGCCTGGAAGAAGGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATTCCTCCGAACTCTCGGCTAAAGAGGTTGACATGGTTATAATTCCAGCAACAACCGGACAAATGGGTGTTCTCCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCAGGGGTTTTATCAGTACACGAAGGGAGCGATATCAAAAAGTACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGAAACTCATACGCTGACATTATCGCTGTTGAAGCTGTGCCTGTAGATCAAATTGATGCTGCCCAAGTACAGAAGGGTCTCGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATCGGAGTTGACGTACACAGTGCTCTGAATTCTGCTCTTACCGGATAG 735 50.2 NGFGKSSIFSASKQLQGNPSTFSFFFFISLRPCESRATTLLSPTMFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2118663 2121279 + MELO3C006270.2.1 Cme06g00342 329491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00342 244 Gene3D - 201 243 - -
Cme06g00342 244 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 114 185 IPR020546 GO:0015986
Cme06g00342 244 Gene3D - 102 200 IPR036771 -
Cme06g00342 244 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 114 195 IPR036771 -
Cme06g00342 244 Hamap ATP synthase epsilon chain [atpC]. 112 232 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cme06g00342 244 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 45 244 - -
Cme06g00342 244 Coils Coil 209 229 - -
Cme06g00342 244 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 117 229 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cme06g00342 244 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 45 244 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cme06g00342 244 CDD F1-ATPase_delta 114 237 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00342 K02134 - csv:101206104 380.178