Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00386 ATGGGTAGCGGAGAAAAGGTCTTCACTTTGAAGGAAGTCGCTGAACACAACAATCACAAGGATTGTTGGCTCATCATCAGTGGCAAGATTTGTCGTTCTTCTGTTCTTATTGAACTGGTATATGATGTGACCAAGTTCTTAGAAGACCATCCTGGTGGTGATGATGTTTTGTTATCAGCTACAGGGAAAGACGCAACTGACGACTTTGAAGACGTGGGGCACAGTGACAATGCAAGAGAAATGATGGATCAATACTACGTTGGGGAGATTGATGCTTCAACAATTCCAAAGAAGGTCGCCTATACGCCTCCAAAACAGCCTCATTACAATCAGGACAAGACATCCGAATTCATCATCAAGCTTCTCCAGTTCCTTGTCCCGCTTGCGATTCTGGGATTGGCAGTTGCCATACGCTTCTACACCAAACAAGCTTGA 435 44.6 MGSGEKVFTLKEVAEHNNHKDCWLIISGKICRSSVLIELVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA 144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2431054 2434194 + MELO3C006316.2.1 Cme06g00386 329535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00386 144 PRINTS Cytochrome B5 signature 50 64 IPR001199 -
Cme06g00386 144 PRINTS Cytochrome B5 signature 40 50 IPR001199 -
Cme06g00386 144 PRINTS Cytochrome B5 signature 65 72 IPR001199 -
Cme06g00386 144 PRINTS Cytochrome B5 signature 78 90 IPR001199 -
Cme06g00386 144 SMART Cyt_b5_2 8 91 IPR001199 -
Cme06g00386 144 PANTHER CYTOCHROME B5-LIKE 1 142 - -
Cme06g00386 144 PANTHER CYTOCHROME B5 1 142 - -
Cme06g00386 144 Gene3D - 2 96 IPR036400 -
Cme06g00386 144 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 100 IPR036400 -
Cme06g00386 144 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 90 IPR001199 -
Cme06g00386 144 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 46 53 IPR018506 GO:0020037
Cme06g00386 144 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 91 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01456 Cme-Chr3:23847288 Cme06g00386 Cme-Chr6:2431054 4.16E-31 dispersed
Cme06g00068 Cme-Chr6:442555 Cme06g00386 Cme-Chr6:2431054 4.75E-44 dispersed
Cme06g00386 Cme-Chr6:2431054 Cme09g02007 Cme-Chr9:23822042 1.12E-53 dispersed
Cme04g01532 Cme-Chr4:22065146 Cme06g00386 Cme-Chr6:2431054 2.27E-64 transposed
Cme05g00704 Cme-Chr5:8215431 Cme06g00386 Cme-Chr6:2431054 2.38E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00386 K23490 - csv:101214209 267.314