Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00498 ATGACACAAGGGTTGGGAGTTCTAAATGCACTTGATGTTGCAAAGACCCAATGGTACCATTTCACAGCCATCATCATAGCCGGAATGGGGTTCTTCACGGATGCCTATGATCTTTTCTGCATTGCGGTGGTCTCGAAGTTGCTCGGTCGGATATACTACTACACGCCGGGGTCCACTCGACCGGGATCACTTCCGCCAAACGTCTCGGCAGCAGTGAGTGGGGTGGCGCTATGTGGAACATTGGCGGGGCAGTTGTTCTTTGGGTGGTTAGGTGACAAGATGGGGAGGAAGAAAGTGTATGGTATAACGTTGATTCTGATGGTGATATGTTCATTTGGGTCAGGGCTAAGTTTTGGACATTCGGCAAAAGCAACAATGACCACTTTATGTTTGTTTCGATTCTGGCTTGGGTTTGGGATTGGGGGCGATTACCCACTTTCAGCTACAATCATGTCTGAATATGCCAACAAGAAAACACGAGGGGCTTTTATAGCTGCTGTTTTTGCCATGCAAGGTTTTGGAATTCTGGCTGGCGGAATCATCGCACTGATTGTTTCAGCTGCATTCAACAATAGATTCTCAGCACCTTCATATGAGAGTGACCCAGTGGGATCAACCGTACCGGAGGCAGACTACGTATGGCGCATCGTTTTAATGTTTGGTGCCATTCCTGCAGGAATGACATACTATTGGCGTATGAAGATGCCCGAAACGGCCCGTTACACCGCTCTAGTAGCAAAGAACGCCAAACAAGCTGCAGCGGACATGTCGAAAGTGTTACAAGTAGAGGTTGAGGCAGAAGAAGAGAAGTTAGAGAAAATAGTAAATACAAGCAAAAATAACTTCGGCTTGTTTTCAAGGCAATTCCTCAAACGGCATGGCCTACACTTGATTGGAACCACAAGCACTTGGTTCTTATTAGACATTGCGTTTTATAGCCAAAACCTTTTCCAAAAAGACATTTTCACTGCAATAGGTTGGCTCCCTCCCGCTAAAACCATGAGTGCTCTTGAAGAGTGCTTCCGTATCGCTAGGGCGCAAACGCTCATTGCTCTTTGTGGGACCGTGCCGGGCTATTGGTTCACCGTGGCTTTGATTGATATCATTGGTAGATTCACCATCCAATTAATTGGGTTCATTATGATGACTATTTTCATGTTTGCCATTGCCTTCCCTTACAACCATTGGATTTTAAAAGAGAATCGAATTGGGTTTCTGGTCATGTATTCTTTAACATTTTTCTTCGCAAATTTTGGACCTAACTCTACTACTTTCATTGTTCCGGCTGAAATATTCCCGGCTAGGCTAAGATCCACGTGTCACGGAATCTCCGCTGCCGCTGGCAAAGCTGGAGCAATTGTTGGTGCTTTCGGGTTCTTGTATGCAGCACAAAATCCTGACCGTACAAAAACCGACCCAGGCTATCCACCGGGTATTGGTGTTAAGAACTCTCTCATTGCACTTGGTTGCATCAATTTCCTTGGTAGTGTGCTTACCTTGTTGGTGCCGGAACCTAAAGGAAAATCGCTTGAGGAGTTGAGCGGTGAAAATGAAGGGCCGGAGGTGGAAGCCGTTGGCCAACAACAAGTGTGA 1593 46.33 MTQGLGVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCIAVVSKLLGRIYYYTPGSTRPGSLPPNVSAAVSGVALCGTLAGQLFFGWLGDKMGRKKVYGITLILMVICSFGSGLSFGHSAKATMTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIIALIVSAAFNNRFSAPSYESDPVGSTVPEADYVWRIVLMFGAIPAGMTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEVEAEEEKLEKIVNTSKNNFGLFSRQFLKRHGLHLIGTTSTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMSALEECFRIARAQTLIALCGTVPGYWFTVALIDIIGRFTIQLIGFIMMTIFMFAIAFPYNHWILKENRIGFLVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQNPDRTKTDPGYPPGIGVKNSLIALGCINFLGSVLTLLVPEPKGKSLEELSGENEGPEVEAVGQQQV 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3137502 3140086 - MELO3C006428.2.1 Cme06g00498 329647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00498 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Cme06g00498 530 TIGRFAM 2A0109: phosphate:H+ symporter 10 516 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cme06g00498 530 CDD MFS_PhT 24 506 - -
Cme06g00498 530 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
Cme06g00498 530 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 1 523 - -
Cme06g00498 530 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 523 - -
Cme06g00498 530 Coils Coil 257 277 - -
Cme06g00498 530 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cme06g00498 530 MobiDBLite consensus disorder prediction 509 530 - -
Cme06g00498 530 Gene3D MFS general substrate transporter like domains 270 529 IPR036259 -
Cme06g00498 530 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme05g00564 Cme06g00498 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g00976 Cme-Chr4:13173820 Cme06g00498 Cme-Chr6:3137502 0 dispersed
Cme05g00564 Cme-Chr5:5659701 Cme06g00498 Cme-Chr6:3137502 0 dispersed
Cme06g00498 Cme-Chr6:3137502 Cme06g01069 Cme-Chr6:7842339 0 dispersed
Cme06g00497 Cme-Chr6:3123150 Cme06g00498 Cme-Chr6:3137502 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00498 K08176 - csv:101213007 1014.99