Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00521 ATGAAACTTTCTCGTCTTAATTCCCTCCGGCGAGTCCAGTCCGGTGAGCTTGTCATGAAGCTCACCGACGACCACGATGATTCCAAACGGCCCCAATTCCCTCTTGATTCCACCTCTTACAAAATCATCGACGAAATTGGTGTCGGTGTCAGCGCCGTCGTGTACAAAGCCATCTGCATTCCTATGAACTCTGTAGTTGTGGCCATTAAAGCCATTGACCTCGATCGATCACGAGCGGATTTCGATGACATCCGAAGAGAAGCCAAAATTCTCTCACTTCTCTCTCACCCCAACATTCTAAATGCTCATTGTTCTTTCACCGTCGATCGTCGTCTTTGGGTCGTCATGCCGTTCATGTCCGCTGGATCTTTACAGTCCATTATTACGTCCTCGTTTCCCGATGGCTTGCCGGAGCCCTGCATTGCCATTGTTCTTCGAGAAATTCTACACGCACTTTCTTACCTCCACGACCAAGGTCATCTCCACCGTGATATTAAAGCCGGCAACATTCTGATAGACTCAAATGGGTCGATCAAGCTTGCTGATTTTGGAGTTTCCACGTCTATTTTCGAGTCGAATTCAAAACAGGGGGTGTCGATTTCTCCATTATCGACGTCTATGATGCTGAAGGAAGTCGCCGGAACGCCGTATTGGATGGCACCGGAGGTGATTCACTCGCACAATGGGTATAGTTTAAAAGCAGATATATGGTCTTTTGGAATCACGGCGTTGGAATTAGCCCATGGACGACCTCCCCTGTCTCATCTCCCTCCTTCCAAATCCCTGCTTCTGAAAATCACGCGGAGGTTTCGATTTTCCGATTACGAAAATCACCATAACAGCAAAAACAAGAACAAATTCTCAAAAGGGTTTAAGGAATTGGTAGCGTCTTGCCTAGATCCGGAGCCATCGAGAAGACCCTGCGCCGAGAAATTGCTCAAACATCCATTCTTCAAAAACAGCAAGGGGCCTGATCTTCTCGTAAAAACTATATTACAAGGATTGCCGAGCGTTGAAGAGCGATTCAAATTGGGAAAATTACAGCGATTGCCATCGATGAAAACCGAGGAAGAAGAGGAAGAAGAATTAGAGAAAGAGATTATAAAACAGAGGAGGATAAGTGGGTGGAATTTCAACGAGGATGGGTTAGAGCTAGACCCAGTTTTTCCAGGGGAAGAATGTTCGATCATGGAGGAGAAGGGTTCAGGGGATTCGAGCGAGTGCTGTTCAGGGCTGTCGGATCTGAGTTCACCAGTGGGGAATGAAAGGGGCGGCGGCGGCGGGGGTGGAGGGGAGGAGGAGGTTGTTGACAGAGAATCAATAGTGGGAGGATTGATGGCGCTGAAAAAGAGTTTAGATGAGCAGAGGAGGGCGGTGGGGAGTTTGATAGAATTGATGGAAGGGGAGAAAGGGGGAGAGATGAGCAGAGAGGAGCAAATGGGGAGATTGATGGAGAAGATGACGAGGGAATTGGAGAATGAGAGGAGGAGGAACTTTGAATTAGAGATGGAGTTGGAATTTCTCAGGCTTCAAATTTCTGCTGCTCATAATAATAACGATGGTGGTGCTTCGGCCACCCTTAACAACTGA 1590 47.67 MKLSRLNSLRRVQSGELVMKLTDDHDDSKRPQFPLDSTSYKIIDEIGVGVSAVVYKAICIPMNSVVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNAHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAIVLREILHALSYLHDQGHLHRDIKAGNILIDSNGSIKLADFGVSTSIFESNSKQGVSISPLSTSMMLKEVAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRRFRFSDYENHHNSKNKNKFSKGFKELVASCLDPEPSRRPCAEKLLKHPFFKNSKGPDLLVKTILQGLPSVEERFKLGKLQRLPSMKTEEEEEEELEKEIIKQRRISGWNFNEDGLELDPVFPGEECSIMEEKGSGDSSECCSGLSDLSSPVGNERGGGGGGGGEEEVVDRESIVGGLMALKKSLDEQRRAVGSLIELMEGEKGGEMSREEQMGRLMEKMTRELENERRRNFELEMELEFLRLQISAAHNNNDGGASATLNN 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3294460 3296070 - MELO3C006454.2.1 Cme06g00521 329670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00521 529 Gene3D Transferase(Phosphotransferase) domain 1 122 371 - -
Cme06g00521 529 Pfam Protein kinase domain 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g00521 529 Coils Coil 477 511 - -
Cme06g00521 529 ProSiteProfiles Protein kinase domain profile. 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g00521 529 Coils Coil 353 373 - -
Cme06g00521 529 SUPERFAMILY Protein kinase-like (PK-like) 39 335 IPR011009 -
Cme06g00521 529 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Cme06g00521 529 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 24 519 - -
Cme06g00521 529 SMART serkin_6 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g00521 529 Gene3D Phosphorylase Kinase; domain 1 29 118 - -
Cme06g00521 529 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 24 519 - -
Cme06g00521 529 MobiDBLite consensus disorder prediction 398 433 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme05g00538 Cme06g00521 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00521 Cme-Chr6:3294460 Cme05g01657 Cme-Chr5:25692530 1.06E-42 dispersed
Cme04g01751 Cme-Chr4:25101881 Cme06g00521 Cme-Chr6:3294460 1.58E-104 transposed
Cme06g02394 Cme-Chr6:31100278 Cme06g00521 Cme-Chr6:3294460 4.37E-108 transposed
Cme07g00580 Cme-Chr7:4976665 Cme06g00521 Cme-Chr6:3294460 8.55E-62 transposed
Cme09g00387 Cme-Chr9:3475453 Cme06g00521 Cme-Chr6:3294460 7.70E-111 transposed
Cme05g00538 Cme-Chr5:5213001 Cme06g00521 Cme-Chr6:3294460 7.71E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64936 PF00069 Pkinase 1.20E-59 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00521 K08835 - csv:101215648 931.013