Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g00581 | ATGAAAACCTCAACCTCCCTTCTCCCAAGTTCTCTCCTCCTCGTCTCCATCTTCATCCTCCTCTTCCAACCTTCCCATCAGCAAACTCCGTCGCCATTTCTCCCCAACCCCAGACTTCTTAAGGCTTATATCGCTCTCCAAGCTTGGAAACATGCCATCACTGCAGACCCAGCTAACTTCACTGCCAATTGGTATGGCCCCAACGTTTGCAACTACACCGGCGTTTTCTGCGCCCCCGCCCTCGACGACTCCGACATCCGCACTGTCGCCGGGATCGACCTCAACCATGCTAACATCTCGGGCACCCTGCCCGACGACCTCGGCCTCCTGACCGACCTTGCGCTGTTTCACATCAACTCCAATCGCTTCTGCGGCACCATCCCCGATTCCTTCCGGTGCCTCACTCTCCTCTTTGAACTCGATATCAGCAACAATGACTTCTCCGGGGAATTCCCCTCTGTAATTCTCTCTCTCCCAGCTCTCAAATTCCTCGACGTTCGATTCAACAAATTCAGCGGCGATCTCCCTTCTTCTCTGTTTGACTTGAAACTCGACGCTCTGTTCATCAACAACAACGATTTCAAATTTTCCTTACCGGAAAACATCGGCAATTCCCCTGTTTCTGTTCTGGTTTTTGCTAATAACAATATCAATGGCTGCCTCCCCTCTAGTATATCAAATATGAACACCACACTCAATGAAATTATAATCACGAGTAGTGGGTTGATTGGGTGTTTGCCGCCGGAAATCGGGTCGTTGAGAAATCTAACTGTCTTCGACGTTAGTGATAATAATCTCGTCGGACCGTTACCTGAGACAATGGCTGGAATGAAGAAATTGGAGCAGCTAAATGTGGCACATAACCAATTATCCGGCGAAATTCCGGCGAGTATTTGCTCGTTGCCGAAATTGCAAAACTTCACTTACTCGTATAATTTCTTCTGCAGTGAGCCGCCGGTTTGCTTGAAACTTCAGGCCAGTGATGACCAGAAAAATTGTTTGCCGGATAGGCCATTCCAACGTTCGCCGGAGGAATGCAAAGCTTTCTACTCTTACCCTGTTGATTGCGGCGTCTTTGGATGTACCCTTCGGCCACCACCACCGCCACCGCCACCTTATTAG | 1122 | 49.55 | MKTSTSLLPSSLLLVSIFILLFQPSHQQTPSPFLPNPRLLKAYIALQAWKHAITADPANFTANWYGPNVCNYTGVFCAPALDDSDIRTVAGIDLNHANISGTLPDDLGLLTDLALFHINSNRFCGTIPDSFRCLTLLFELDISNNDFSGEFPSVILSLPALKFLDVRFNKFSGDLPSSLFDLKLDALFINNNDFKFSLPENIGNSPVSVLVFANNNINGCLPSSISNMNTTLNEIIITSSGLIGCLPPEIGSLRNLTVFDVSDNNLVGPLPETMAGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTYSYNFFCSEPPVCLKLQASDDQKNCLPDRPFQRSPEECKAFYSYPVDCGVFGCTLRPPPPPPPPY | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3740501 | 3741640 | + | MELO3C006506.2.1 | Cme06g00581 | 329730 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g00581 | 373 | Pfam | Leucine rich repeat | 231 | 290 | IPR001611 | GO:0005515 | |
Cme06g00581 | 373 | Pfam | Leucine rich repeat N-terminal domain | 45 | 77 | IPR013210 | - | |
Cme06g00581 | 373 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 | 21 | 369 | - | - | |
Cme06g00581 | 373 | Gene3D | Ribonuclease Inhibitor | 42 | 208 | IPR032675 | - | |
Cme06g00581 | 373 | SUPERFAMILY | L domain-like | 43 | 323 | - | - | |
Cme06g00581 | 373 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 21 | 369 | - | - | |
Cme06g00581 | 373 | Gene3D | Ribonuclease Inhibitor | 209 | 344 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g00299 | Cme-Chr1:2243543 | Cme06g00581 | Cme-Chr6:3740501 | 2.37E-137 | dispersed | |
Cme02g01330 | Cme-Chr2:19221068 | Cme06g00581 | Cme-Chr6:3740501 | 1.06E-152 | dispersed | |
Cme05g02020 | Cme-Chr5:28631157 | Cme06g00581 | Cme-Chr6:3740501 | 7.89E-92 | dispersed | |
Cme06g00581 | Cme-Chr6:3740501 | Cme11g02178 | Cme-Chr11:29123538 | 6.62E-129 | dispersed | |
Cme07g00332 | Cme-Chr7:2123243 | Cme06g00581 | Cme-Chr6:3740501 | 6.33E-78 | dispersed | |
Cme06g00581 | Cme-Chr6:3740501 | Cme05g01968 | Cme-Chr5:28235872 | 8.51E-159 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g00581 | - | - | cmo:103483684 | 721.079 |