Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00664 ATGGGCTGTGTTATGGGAAAGTGTTGTACTTCCAGCCATTACCCGCCGTCTACCGACGGCGATATCTCACGATTTGGTGATGCCCCACCGTGTAGTTTACATGGAAAGCATATACTAACGGGAAGGACATTGGAGTCTGTTCGTGTGCCTTCTCATATGTACAATTTGGAGTACTCGCTCTTGACCCAGCGTGGCTACTACCCCGATTCCCCTGATAAAGAAAACCAAGACAATTTCTGTGTTAGTACACACATTCAAGGTAACCCAAATGTTCATATCTTTGGTGTTTTCGATGGTCATGGTCAATTTGGGATGCAGTGTTCGAATTTCGTTAAGGATAGGGTTGTGCAATTACTCTGTAATGACTCTAGATTGTTGGAAGATCCCGTTAAGGCTTATAATTCCGCATTTTTGACTGCGAATGATGAATTGCGTAATAGTGAGATTGATGATTCCATGAGTGGTACAACAGCCATTACTGTTCTTGTTATTGGGAATACTCTTTATGTTGCGAATGTGGGTGATTCGAGGGCGGTAGTGGCTGTTAAAAATGGGAATCGAATTGTGGCTCAGGATATGTCTCATGATCAAACACCATTTAGGAAGGATGAGTGTGAGAGAGTAAAGCTCGCCGGGGCGAGGGTTTTGACAATTGATCAAATTGAGGGGCTTAGAGATCCGGATATTCAAGTTTGGGGTGATGAGGAGAGTGAGGGAAATGATCCTCCTCGATTGTGGTTTCCTAATAGTTTGTATCCTGGTACTGCATTTACACGGAGTGTAGGAGACAGTACAGCAGAGAAGATTGGTGTCATTGCTGTCCCTGAGGTTTCAGTTGTTCAACTGACTCCAAACCATCTTTTCTTTGTCATTGCAAGCGATGGAGTTTTCGAGTTCCTCACAAGTCAAGCTGTTGTTGATATGGCTGCAAGGTATAGTGATCCACGGGATGCATGCTCTGCTATTGCTGGAGAATCATATAAGCTATGGTTGGAGCATGAAAACCGGACAGATGATATAACAATCATCATCGTTCACATCAAAGGCCTCTCTAATTCAGGTGGTTCTGGAACCGTTGGGCTGAATGGGGTCTGCATAAGGCATTCAAATTCAGAGCGGGGCACCTCCGAGATATCGGCTACCACCGGAACTTCAGAGGTCTTTCGCTCCTTCAGAAGTGATTTCTCAGATCTGCACGTCTCTCAGCATGTGGGTTTGATGAACAGGAGCACAGCAATTGTCGTTCCATCGCCTGCGCAGCACCGACCATTAGAAGTGGAAGTGGGCTAA 1290 45.35 MGCVMGKCCTSSHYPPSTDGDISRFGDAPPCSLHGKHILTGRTLESVRVPSHMYNLEYSLLTQRGYYPDSPDKENQDNFCVSTHIQGNPNVHIFGVFDGHGQFGMQCSNFVKDRVVQLLCNDSRLLEDPVKAYNSAFLTANDELRNSEIDDSMSGTTAITVLVIGNTLYVANVGDSRAVVAVKNGNRIVAQDMSHDQTPFRKDECERVKLAGARVLTIDQIEGLRDPDIQVWGDEESEGNDPPRLWFPNSLYPGTAFTRSVGDSTAEKIGVIAVPEVSVVQLTPNHLFFVIASDGVFEFLTSQAVVDMAARYSDPRDACSAIAGESYKLWLEHENRTDDITIIIVHIKGLSNSGGSGTVGLNGVCIRHSNSERGTSEISATTGTSEVFRSFRSDFSDLHVSQHVGLMNRSTAIVVPSPAQHRPLEVEVG 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4280650 4283464 + MELO3C006581.2.1 Cme06g00664 329813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00664 429 Gene3D - 43 349 IPR036457 -
Cme06g00664 429 Pfam Protein phosphatase 2C 82 323 IPR001932 -
Cme06g00664 429 SMART PP2C_4 57 345 IPR001932 -
Cme06g00664 429 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 36 427 - -
Cme06g00664 429 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 36 427 - -
Cme06g00664 429 CDD PP2Cc 73 347 IPR001932 -
Cme06g00664 429 ProSiteProfiles PPM-type phosphatase domain profile. 57 347 IPR001932 -
Cme06g00664 429 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Cme06g00664 429 SUPERFAMILY PP2C-like 45 349 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme06g00664 Cme11g01952 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01389 Cme-Chr2:20104680 Cme06g00664 Cme-Chr6:4280650 3.74E-140 dispersed
Cme06g00664 Cme-Chr6:4280650 Cme05g00950 Cme-Chr5:13176826 2.53E-29 dispersed
Cme11g01952 Cme-Chr11:27581502 Cme06g00664 Cme-Chr6:4280650 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00664 - - csv:101212684 832.787