Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00697 CCTCACCAAATCGAATCCTTGGGTTTGGGCTTTCATCTTCTTCGCTTCGGTAGCCGAGAGTTCCATTGGAATCTTCATTCAAATCGCCATTTCTTCTTTACAATCTTTGTTGAAATGCAAGTCGTTTCCAGCTCTCGTCGCCTCTCCATTCTTCTCAAATCTTCTTCCACCTTCCTCCAGTTTGATCGATTTCTTGTTTCTAATTTTCCAGTAAACCAGGATCCTCCAGCTTCTCATCAATGGCGGACTGTTTCTGGGATAGCTCGGCAATGTTGTTCACCAATGGCGCCAGACTGTTCCATACCTATGTATTTATCGATTCCTAATGCTTCTTTTTCATCAGTGGCACATGCTGCTGAGGAAATTTCTACAGTCACTGCCAAGGAATTATATGATAAAATGCTTGAATCTGTAGAGGTTAAGAGAAGCATGCCCCCCAATGCTTGGATGTGGTCATTGATCCAAAATTGTAAATCCGATGAAGATATTCAGCTTCTATTTGGCATTTTGGAAAGACTGCGGAAATTTAGGCTATCGAATCTTCGTATTCCTGATAATTATAATTCTCACCTTTGCCAAGAGGTCGCCAAAGCATGTGTACGGGCGGGTGCAATTCAATTTGGAAAGAAGACCTTGTGGATCCATAACGTAAATGGATTGACGCCCAGTGTTGCATCTGCTCACCATCTACTGGCATATGCCGAAGAGCACAATGATCTTAAACTTATGGCTGAAGTTGTGACACTATTAAGAAGGAATAAATTGCCACTACAACCTGGTACTGCAGATATTGTTTTCAGGATATGTTATAATGCTGACAATTGGGAGTTGCTTTCCAAATACTTCAAAAAATTCTCTGAGGCTGGAGTAAAATTTCGCCGAACATCTTTTGACACGTTGATGAGATTTGCTTCCAAAAGAGGAGATGTTGATTGTCTATGGAAATTTGATAGGATGAGAGCTGAAACAACGAAGCAACATACTCTTGGAAGTGCATTTTCAAGTGCTAAGGTAATAAAGTTCAAAACATCTTTAGACGTGTTCCATTCCATTGCAAAATTAATTCGACCTATGTGGTTCTAG 1083 40.63 PHQIESLGLGFHLLRFGSREFHWNLHSNRHFFFTIFVEMQVVSSSRRLSILLKSSSTFLQFDRFLVSNFPVNQDPPASHQWRTVSGIARQCCSPMAPDCSIPMYLSIPNASFSSVAHAAEEISTVTAKELYDKMLESVEVKRSMPPNAWMWSLIQNCKSDEDIQLLFGILERLRKFRLSNLRIPDNYNSHLCQEVAKACVRAGAIQFGKKTLWIHNVNGLTPSVASAHHLLAYAEEHNDLKLMAEVVTLLRRNKLPLQPGTADIVFRICYNADNWELLSKYFKKFSEAGVKFRRTSFDTLMRFASKRGDVDCLWKFDRMRAETTKQHTLGSAFSSAKVIKFKTSLDVFHSIAKLIRPMWF 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4523502 4526752 - MELO3C006614.2.1 Cme06g00697 329846

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00697 360 Gene3D Tetratricopeptide repeat domain 108 342 IPR011990 GO:0005515
Cme06g00697 360 PANTHER ADENYLYL CYCLASE 39 339 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00697 - - - cmo:103483802 590.112
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g353 . Blo12g00042 . . . . . . . . . Cma14g01640 . Car14g01466 . . Cpe03g01382 Bhi01g00958 Tan10g0959 . . . . Lcy11g1446 . . . . . . . . Cone15ag0785 . . . . . Cme06g00697 . . . . . . . . . . Cmo14g01679 . . . . . . . . . . . . . Cla05g00621 Cam05g0682 . Cco05g0687 Clacu05g0676 Cmu05g0644 . . Csa03g01421 Chy06g00662 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009080 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cme06g00697 Cme_Chr06 FPKM 5.720149 6.181205 9.084684 9.811969 11.964482 10.200633 11.950734 21.823044 19.68166 20.480995