Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00865 ATGGAGAAGGACAAACCCCAAAGCTTTTCTGGTGGATTTCCGCCACCATCAAGTCGTTACTCAGGTCTTTCACCAACTGGAAGCATTTTCAATGGAAAATCTGAGGCAACTTCATCTTCAATGTTGCTTCCTCCAATGCCTTCCGGTGGTCTTTCAGATTCTGGTCAATTTGGTCATGGAATGCCCACTGATTCTAATCGATTCAGCCATGATATTAGTAGAATGCCTGATAACCCACCAAGAAATATTGGTCACAGACGTGCCCATTCAGAAATACTGACCCTTCCTGATGATATTTGTTTTGACAATGACCTCGGTGTGATTGGTAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATCTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCCTCGACTGCCACCTCCACGATACAAGTTGGCGAGTCATCTTCGGCTGTTGGAGAAGCAAGATCAACTTCTACTTCAACAATTGGAGCAGCTACCTCCAAAGATGATGCTGCCGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACACCAGCATAGCCAGTCCATGGATGGCTTGTCAACCATAAAGCCTGAGATGCTCGTCTCTGGATCTGAAGAAGCCTCTGCAGCCGATTCCAAGAAAGCCATGTCAGCTACAAAACTCGCTGAGCTTGCGTTAATTGACCCCAAACGTGCTAAGAGGATATGGGCAAATCGACAGTCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGTTACATCGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGATACAAACGGTCTTTCTGCTGAGAACAATGAACTAAAGCTGCGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGCTCTAAACGAAGCACTCAAAGAGGAAATTCAGCATTTGAAAGTACTGACTGGCCAAGCAATCCCAAATGGTGGATCAGTTACAAACTTTGCTTCCTTTGGAGCTGCTGCCCAACCCTTTTACCCAAGCAATCAAGCAATGCACACTTTGTTAACTGCACAGCAGTTTCAACAACTTCAAATCCACTCACAGCAGCAACAACAACATTTCCAATACCATCAGCTTCATCAGCTTCATCAACAGTCAACTGGAGACAACAAATCGAAAGGATCGGCATCCTCTCCAAATCCAAAAGACAACACATCAGATACGTCCTCTACCACTTGTTGA 1251 45.24 MEKDKPQSFSGGFPPPSSRYSGLSPTGSIFNGKSEATSSSMLLPPMPSGGLSDSGQFGHGMPTDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDICFDNDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSTATSTIQVGESSSAVGEARSTSTSTIGAATSKDDAAVGLKERPRVRHQHSQSMDGLSTIKPEMLVSGSEEASAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLSAENNELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAIPNGGSVTNFASFGAAAQPFYPSNQAMHTLLTAQQFQQLQIHSQQQQQHFQYHQLHQLHQQSTGDNKSKGSASSPNPKDNTSDTSSTTC 416
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 5925532 5931182 + MELO3C006784.2.1 Cme06g00865 330014
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00865 416 MobiDBLite consensus disorder prediction 147 167 - -
Cme06g00865 416 MobiDBLite consensus disorder prediction 384 416 - -
Cme06g00865 416 MobiDBLite consensus disorder prediction 1 84 - -
Cme06g00865 416 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 410 - -
Cme06g00865 416 CDD bZIP_plant_RF2 232 281 IPR044759 GO:0003700|GO:0006355
Cme06g00865 416 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 410 - -
Cme06g00865 416 MobiDBLite consensus disorder prediction 11 45 - -
Cme06g00865 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 229 292 IPR004827 GO:0003700|GO:0006355
Cme06g00865 416 Gene3D - 230 283 - -
Cme06g00865 416 Coils Coil 247 316 - -
Cme06g00865 416 Pfam bZIP transcription factor 231 285 IPR004827 GO:0003700|GO:0006355
Cme06g00865 416 SUPERFAMILY Leucine zipper domain 231 282 IPR046347 GO:0003700|GO:0006355
Cme06g00865 416 SMART brlzneu 227 291 IPR004827 GO:0003700|GO:0006355
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cme06g00865 Cme11g02227 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01318 Cme-Chr1:16531644 Cme06g00865 Cme-Chr6:5925532 1.65E-51 dispersed
Cme03g00331 Cme-Chr3:4324576 Cme06g00865 Cme-Chr6:5925532 3.08E-61 dispersed
Cme06g00865 Cme-Chr6:5925532 Cme06g00875 Cme-Chr6:6023138 0 dispersed
Cme10g00697 Cme-Chr10:4382104 Cme06g00865 Cme-Chr6:5925532 3.87E-13 dispersed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41474 PF00170 bZIP_1 1.90E-08 CL0018 Cme TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00865 - - csv:101210291 729.554