Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g00865 | ATGGAGAAGGACAAACCCCAAAGCTTTTCTGGTGGATTTCCGCCACCATCAAGTCGTTACTCAGGTCTTTCACCAACTGGAAGCATTTTCAATGGAAAATCTGAGGCAACTTCATCTTCAATGTTGCTTCCTCCAATGCCTTCCGGTGGTCTTTCAGATTCTGGTCAATTTGGTCATGGAATGCCCACTGATTCTAATCGATTCAGCCATGATATTAGTAGAATGCCTGATAACCCACCAAGAAATATTGGTCACAGACGTGCCCATTCAGAAATACTGACCCTTCCTGATGATATTTGTTTTGACAATGACCTCGGTGTGATTGGTAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATCTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCCTCGACTGCCACCTCCACGATACAAGTTGGCGAGTCATCTTCGGCTGTTGGAGAAGCAAGATCAACTTCTACTTCAACAATTGGAGCAGCTACCTCCAAAGATGATGCTGCCGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACACCAGCATAGCCAGTCCATGGATGGCTTGTCAACCATAAAGCCTGAGATGCTCGTCTCTGGATCTGAAGAAGCCTCTGCAGCCGATTCCAAGAAAGCCATGTCAGCTACAAAACTCGCTGAGCTTGCGTTAATTGACCCCAAACGTGCTAAGAGGATATGGGCAAATCGACAGTCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGTTACATCGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGATACAAACGGTCTTTCTGCTGAGAACAATGAACTAAAGCTGCGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGCTCTAAACGAAGCACTCAAAGAGGAAATTCAGCATTTGAAAGTACTGACTGGCCAAGCAATCCCAAATGGTGGATCAGTTACAAACTTTGCTTCCTTTGGAGCTGCTGCCCAACCCTTTTACCCAAGCAATCAAGCAATGCACACTTTGTTAACTGCACAGCAGTTTCAACAACTTCAAATCCACTCACAGCAGCAACAACAACATTTCCAATACCATCAGCTTCATCAGCTTCATCAACAGTCAACTGGAGACAACAAATCGAAAGGATCGGCATCCTCTCCAAATCCAAAAGACAACACATCAGATACGTCCTCTACCACTTGTTGA | 1251 | 45.24 | MEKDKPQSFSGGFPPPSSRYSGLSPTGSIFNGKSEATSSSMLLPPMPSGGLSDSGQFGHGMPTDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDICFDNDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSTATSTIQVGESSSAVGEARSTSTSTIGAATSKDDAAVGLKERPRVRHQHSQSMDGLSTIKPEMLVSGSEEASAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLSAENNELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAIPNGGSVTNFASFGAAAQPFYPSNQAMHTLLTAQQFQQLQIHSQQQQQHFQYHQLHQLHQQSTGDNKSKGSASSPNPKDNTSDTSSTTC | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5925532 | 5931182 | + | MELO3C006784.2.1 | Cme06g00865 | 330014 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g00865 | 416 | MobiDBLite | consensus disorder prediction | 147 | 167 | - | - | |
Cme06g00865 | 416 | MobiDBLite | consensus disorder prediction | 384 | 416 | - | - | |
Cme06g00865 | 416 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
Cme06g00865 | 416 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 8 | 410 | - | - | |
Cme06g00865 | 416 | CDD | bZIP_plant_RF2 | 232 | 281 | IPR044759 | GO:0003700|GO:0006355 | |
Cme06g00865 | 416 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 8 | 410 | - | - | |
Cme06g00865 | 416 | MobiDBLite | consensus disorder prediction | 11 | 45 | - | - | |
Cme06g00865 | 416 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 229 | 292 | IPR004827 | GO:0003700|GO:0006355 | |
Cme06g00865 | 416 | Gene3D | - | 230 | 283 | - | - | |
Cme06g00865 | 416 | Coils | Coil | 247 | 316 | - | - | |
Cme06g00865 | 416 | Pfam | bZIP transcription factor | 231 | 285 | IPR004827 | GO:0003700|GO:0006355 | |
Cme06g00865 | 416 | SUPERFAMILY | Leucine zipper domain | 231 | 282 | IPR046347 | GO:0003700|GO:0006355 | |
Cme06g00865 | 416 | SMART | brlzneu | 227 | 291 | IPR004827 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme06g00865 | Cme11g02227 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g01318 | Cme-Chr1:16531644 | Cme06g00865 | Cme-Chr6:5925532 | 1.65E-51 | dispersed | |
Cme03g00331 | Cme-Chr3:4324576 | Cme06g00865 | Cme-Chr6:5925532 | 3.08E-61 | dispersed | |
Cme06g00865 | Cme-Chr6:5925532 | Cme06g00875 | Cme-Chr6:6023138 | 0 | dispersed | |
Cme10g00697 | Cme-Chr10:4382104 | Cme06g00865 | Cme-Chr6:5925532 | 3.87E-13 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
41474 | PF00170 | bZIP_1 | 1.90E-08 | CL0018 | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g00865 | - | - | csv:101210291 | 729.554 |