Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00921 ATGGAGGAGAAAGAAACCGGAGTTTCTAGGTTTACAGTTATGAATGATGAAGCCCTAGACAACTTCCAGTTAGCTCCAAGAACAGAAGCCCCAAAATCAACCAGTGAGTCTAAAGTAACGGAGGTCGCGGTAGCTGCTCCACCACCGGGGTTTGTAGCGGCCACTGATACACCACCGGCGAGTGTAGCGGTGTCTAGTACTGAAACAAAGAAGAAGAGAGGGAGACCGAGAAAGTACGGACCGGATGGGAAGCGGTCACTGACATTAGCGTTGTCTCCGATGCCGATATCGTCGTCGATTCCACTGACCGGAGAGTTCCCAAATTGGAAACGAGATAACGAGATTTCTCAAGCGATAGTGAAGAAGCCGCAGAGATTCGAGTTTGAGAATCCTGGTCAGAGACTTGCGTACTCTGTTGGTGCAAATTTTACTCCCCATGTCATCACTGTCAATGCTGGAGAGGACATTACAATGAAGGTTATGTCTTTCTCTCAACAAGAATCCCGAGCTATTTGTATTCTTTCTGCAAATGGGACAATTTCAAACGTTACCCTTCGGCAGGCGACTTCTTCTGGAGGTACCTTAACATATGAGGGTCGTTTTGAAATACTTGCATTAACCGGATCGTATATGCCCACACAGAATGGAGCTACAAAGAGCAGATGTGGTGGGATGAGTGTCTCGCTAGCGGGTCAAGATGGACGAGTTGTTGGCGGTGGACTTGCAGGTTTGTTGGTAGCTGCTGGTCCTGTGCAAATTGTGGTCGGCAGTTTCCTTCCAGGTCACCAGCAAGAACAAAAGCCAAAAAAACCTAGAAACGAGTCCACAACCATTTTCTTCCCTCCCGTCAACACCATTGCTGGTGAAGAAATGAAGGCAATGTATGCTGGTGGTAACAAGCCTATTCTCACGACGCCGTCCTTTCGAGAACAACATAATCCACCGTCCCCTACCCCTGTGACAGGCTTCAAAATCTCCTCCACTGACAACTTACCTCTATCTGATCAAGAACCAAAAACACAAAGTCAATCAAACTGTGAGGTTTCTTGTTGA 1053 47.39 MEEKETGVSRFTVMNDEALDNFQLAPRTEAPKSTSESKVTEVAVAAPPPGFVAATDTPPASVAVSSTETKKKRGRPRKYGPDGKRSLTLALSPMPISSSIPLTGEFPNWKRDNEISQAIVKKPQRFEFENPGQRLAYSVGANFTPHVITVNAGEDITMKVMSFSQQESRAICILSANGTISNVTLRQATSSGGTLTYEGRFEILALTGSYMPTQNGATKSRCGGMSVSLAGQDGRVVGGGLAGLLVAAGPVQIVVGSFLPGHQQEQKPKKPRNESTTIFFPPVNTIAGEEMKAMYAGGNKPILTTPSFREQHNPPSPTPVTGFKISSTDNLPLSDQEPKTQSQSNCEVSC 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6454924 6459222 - MELO3C006833.2.1 Cme06g00921 330070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00921 350 MobiDBLite consensus disorder prediction 304 350 - -
Cme06g00921 350 ProSiteProfiles PPC domain profile profile. 140 283 IPR005175 -
Cme06g00921 350 MobiDBLite consensus disorder prediction 301 350 - -
Cme06g00921 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 8 330 - -
Cme06g00921 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 330 IPR039605 GO:0003680
Cme06g00921 350 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 264 - -
Cme06g00921 350 Gene3D - 145 274 - -
Cme06g00921 350 MobiDBLite consensus disorder prediction 17 86 - -
Cme06g00921 350 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 258 IPR005175 -
Cme06g00921 350 CDD DUF296 144 258 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme06g00921 Cme09g01500 CCT
Cme06g00921 Cme09g01500 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00256 Cme-Chr6:1564295 Cme06g00921 Cme-Chr6:6454924 2.54E-93 dispersed
Cme06g00921 Cme-Chr6:6454924 Cme10g01713 Cme-Chr10:23718509 3.21E-73 dispersed
Cme09g01500 Cme-Chr9:20170295 Cme06g00921 Cme-Chr6:6454924 2.39E-114 transposed
Cme06g00921 Cme-Chr6:6454924 Cme09g01675 Cme-Chr9:21436169 5.51E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00921 - - csv:101217222 642.884