Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00928 ATGGGTTTTCGATTCCATATGGCGAGAAGAGATGGTGCAATTGGATCGTGCCTCTGTATCGTTGTGGTTTTAATTTCTTCGCAAATTCATGTTACAGCCAGATCGGATAAGGAAATTAGGGAGAGATTTTATGGGAACTTGATAAACTCGACGGCTCCGACTTCCGGTGACGGTAGCTTTGCTCAAATGTTCGATAAGGTTCTTGAGAAGGAGTTCTCAGACAATGATCTGCCTGAAGGTTCTGGTGGAAGCAGCTTTAATAGCAGTGTCGCTGATCAGGAGGCAGAGCTGGAGACAGTAGCTAAAATCACACATGAGAAGGGCAAGAAAAATGATAGTCAAAAGACAAATGGGACAAGAGCATTCCAGTTACAGGATGTTTTTTCTCTGGAAAATGAAGAATCTGATGACGTCACAACATTGATTGATAAAAAAGACAATGTATTTGTGATGTCAAACAAGAAGTCAAAGTATCCAGTACTTCAAGTAGATTTGAGATTGATCTCAGACTTGGTGGTGGTTATTGTTTCTGCCGCAATTGGAGGAATTATCTTTTCTTGTTTAGGGCAACCTGTTATTGTGGGCTATCTTCTTGCGGGATCAATCATTGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTTGTATTTCTTCTTTTTGCTCTAGGACTCGAGTTTTCTTTGACAAAGTTAAAAGTTGTGGGAGCTGTGGCTGTTTTTGGAGGTTTTCTACAGATCATAATATTTATGTTCTTGTGTGGTATTGTTGCCATGTTAAGTGGAGCTAAATTATCCGAGGGTGTATTTGTTGGTTCTTTTCTATCAATGTCATCTACAGCAGTGGTGGTCAAGTTCTTGGTAGAACGGAACAGCAGTAATACACTTCATGGTCAAGTTACTATTGGAACACTCATCTTACAGGATTGTGCCGTTGGTTTGTTGTTTGCCTTGCTCCCAGTTTTGGGTGGTCACAATGGTCTTATCTTAGGAATGATATCTATGGGAAAGTTGCTACTGGTGTTGTCAGTATATCTCACAGCCGCATCTATTTTGTCATGGTCATTTGTTCCCCGCTTTCTTAAGTTGATGATGCAGCTGTCATCTCAAACAAATGAGTTGTATCAGCTTGCTGCTGTGGCATTCTGCTTGCTGTCTGCTTGGTGCAGTGATAAGTTGGGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGGTATCTACCACCGAGTTTGGTCAACATACTTTAGATCAGGTGGAACCAATCCGCAATTTGTTTGCAGCTTTGTTCCTTTCAAGTATTGGAATGCTCATTCATGTACATTTTCTTTGGAGCCATTTGGACATTTTGCTAGCGTCTGTAATGCTGGTTGTGTTTGTCAAGACTGCAGTTGCTACCATTGTTGCAAAGGCATTTGGATACGGTATTAGGACTTCTTTCCAGGTTGGGGTCATGCTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTAAGCCGTGCTTCAAATCTTCACCTCATTGGGGGGAAGGTTTATCTGCTTCTTCTTGGGACAACGGCACTTAGTCTGGAGAAAGTATCAATGATTGAAGCACATAACAGAATGTTGTGA 1641 41.62 MGFRFHMARRDGAIGSCLCIVVVLISSQIHVTARSDKEIRERFYGNLINSTAPTSGDGSFAQMFDKVLEKEFSDNDLPEGSGGSSFNSSVADQEAELETVAKITHEKGKKNDSQKTNGTRAFQLQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFLCGIVAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTAASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMVSTTEFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVATIVAKAFGYGIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLLGTTALSLEKVSMIEAHNRML 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6511481 6519435 - MELO3C006841.2.1 Cme06g00928 330077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00928 546 Pfam Sodium/hydrogen exchanger family 172 533 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cme06g00928 546 PANTHER K(+) EFFLUX ANTIPORTER 5 30 534 - -
Cme06g00928 546 Gene3D - 165 540 IPR038770 -
Cme06g00928 546 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 30 534 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00228 Cme-Chr2:1826773 Cme06g00928 Cme-Chr6:6511481 0 dispersed
Cme03g02155 Cme-Chr3:28673606 Cme06g00928 Cme-Chr6:6511481 3.83E-132 dispersed
Cme06g00197 Cme-Chr6:1209989 Cme06g00928 Cme-Chr6:6511481 3.31E-42 dispersed
Cme06g00928 Cme-Chr6:6511481 Cme10g01393 Cme-Chr10:16359669 6.95E-22 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00928 - - csv:101207607 971.074