Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g00938 | GCTGATTTTCCTCTCAAATGCCTGTGTTTGCTTCTGTTTTTAGACTCTTTGCTTCTTTCAAGTGCTCTTTTTCTGAAAACTTATGTTGTTCAAATGGATAGGTCCGCAATGCCGGCCTCTTTTACGAATCATTTTGAGTGGTACTCCAATGTGCTAAGCAATGTGGTTGTTGACCTTGAACGAGAAGGTAATGGTGGAGGAGGTGAAGAGAGGATCATTTATAGTTATCAGAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGTCGAGAAGCTCGAGGAAGAAGATGGGGTTGTGGCCATTTTTCCTGAGATGAAGTACGAGCTCCATACCACCAGAAGCCCCAGATTTCTTGGGCTTGAACCAGCTGATAGCAACAGCGCCTGGTCTCAGCAAATTGCAGACCATGATGTGGTTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGACAGCTTTGACGATGCAGGAATGTCGCCGGTGCCGGCGCATTGGAAAGGGGAATGTGAAACAGGGAGAGGGTTTACGAAACAGAATTGTAACAGAAAGATCGTCGGGGCCAGAGTGTTTTACCATGGGTATCAAGCTGCAACTGGGAAATTTAACGAACAGTTGGAGTACAAGTCGCCGAGGGATCAAGATGGGCATGGAACTCACACGGCAGCTACCGTCGCTGGCTCTCCGGTGGCCGGCGCGAGTCTTCTTGGTTATGCTTATGGAACGGCTAGAGGAATGGCGCCCGGAGCTAGAATTGCGGCTTACAAGGTCTGTTGGATTGGTGGCTGTTTTAGCTCCGACATTTTGTCGGCTGTTGACAGAGCTGTGGCCGATGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTTTCTTCGTACTATCGCGATAGTCTCTCAGTTGCAGCATTTGGGGCAATGGAGATGGGCGTGTTTGTTTCTTGCTCGGCTGGAAATGGAGGGCCGGACCCTGTCAGTCTCACGAATGTATCACCATGGATAACCACCGTCGGTGCCAGTACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCGATGGCAGAACAATGAGCGGCGCTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAACAATTCCCAATTGTCTACATGGGGAGTAACTCGAGCAGCCCTGATCCGAGCTCGCTATGTTTAGAGGGAACTTTAGATCCCCATGTCGTCGCCGGAAAAATTGTGATATGTGATCGGGGAATTAGCCCTCGGGTCCAGAAGGGTGTGGTGGTGAAAAATGCTGGTGGGATTGGGATGATTCTGTCGAACACGGTCGCGAATGGGGAAGAACTTGTTGCCGATTGCCATTTAGTACCGGCTGTTGCCGTTGGGGAAAAAGAAGGCAAAGCAATTAAACAGTACGCATTAACGAATCGAAAAGCGACGGCGACATTAGGGTTTTTAGGGACAAGATTAGGGGTAAAACCGTCGCCGGTGGTGGCGGCGTTTTCATCTAGAGGACCAAATTTCCTCACACTTGAGATCCTAAAGCCGGATCTGGTGGCTCCTGGCGTTAACATCCTCGCCGCTTGGACCGGAAAAACAGGACCGTCGAGCTTAACGACGGACACAAGAAGGGTCAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGCGGCGTAGCGGCTCTAATCAAATCGAAGCATCCCGATTGGAGCCCGTCGGCGATTAAATCCGCACTGATGACCACCGCTTACATTCACGATAACACCTACAAACCTCTGCAAGACTCCTCCGCCGCATCACCGTCAAGTCCGTACGACCATGGCGCCGGCCACATAAACCCTAGAAAAGCCCTAGATCCTGGTTTGGTTTACGAAATTCAGCCGCAAGATTACTTCGACTTCCTCTGTACACAGGATTTAACCCCAACACAACTCAAAGTCTTCTCCAAATATTCAAACAGAACATGTCGTCGTCTTCTCCCCAACCCTGGAGACTTGAATTACCCGGCAATCTCCGCCGTTTTCCCTGAGAAAACCTCCGTCACTTCGCTGACCCTTCACCGAACCGTCACCAACGTCGGCCCTGCAACCTCCAGTTACCATGCGGTGGTGACTCCGTTCAAGGGCGCGGCCGTGAAAGTTGAGCCGGAGAGTCTGAATTTCACAAGAAGGTATGAAAAGCTTTCTTATAGAATCACTTTTGTGACGAAGAAGAGACTGAGTATGCCGGAATTTGGAGGGTTGATTTGGAAAGATGGAAGTCACAAAGTGAGAAGCCCCATTGTGATGACTTGGTTGTCGTTTGTTTGA | 2319 | 49.59 | ADFPLKCLCLLLFLDSLLLSSALFLKTYVVQMDRSAMPASFTNHFEWYSNVLSNVVVDLEREGNGGGGEERIIYSYQNVFHGVAARLSEEEVEKLEEEDGVVAIFPEMKYELHTTRSPRFLGLEPADSNSAWSQQIADHDVVVGVLDTGIWPESDSFDDAGMSPVPAHWKGECETGRGFTKQNCNRKIVGARVFYHGYQAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPVAGASLLGYAYGTARGMAPGARIAAYKVCWIGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGDGRTMSGASLYRGRITIPENKQFPIVYMGSNSSSPDPSSLCLEGTLDPHVVAGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTVANGEELVADCHLVPAVAVGEKEGKAIKQYALTNRKATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYIHDNTYKPLQDSSAASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFDFLCTQDLTPTQLKVFSKYSNRTCRRLLPNPGDLNYPAISAVFPEKTSVTSLTLHRTVTNVGPATSSYHAVVTPFKGAAVKVEPESLNFTRRYEKLSYRITFVTKKRLSMPEFGGLIWKDGSHKVRSPIVMTWLSFV | 772 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6569971 | 6572641 | + | MELO3C006851.2.1 | Cme06g00938 | 330087 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g00938 | 772 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 20 | 113 | IPR037045 | - | |
Cme06g00938 | 772 | Pfam | Subtilase family | 139 | 592 | IPR000209 | GO:0006508|GO:0008236 | |
Cme06g00938 | 772 | Gene3D | Peptidase S8/S53 domain | 140 | 634 | IPR036852 | GO:0004252|GO:0006508 | |
Cme06g00938 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 216 | 229 | IPR015500 | - | |
Cme06g00938 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 550 | 566 | IPR015500 | - | |
Cme06g00938 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 138 | 157 | IPR015500 | - | |
Cme06g00938 | 772 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 551 | 561 | IPR023828 | - | |
Cme06g00938 | 772 | Pfam | Fibronectin type-III domain | 668 | 765 | IPR041469 | - | |
Cme06g00938 | 772 | Pfam | PA domain | 394 | 468 | IPR003137 | - | |
Cme06g00938 | 772 | Gene3D | - | 346 | 490 | - | - | |
Cme06g00938 | 772 | CDD | PA_subtilisin_like | 353 | 482 | - | - | |
Cme06g00938 | 772 | SUPERFAMILY | Subtilisin-like | 112 | 625 | IPR036852 | GO:0004252|GO:0006508 | |
Cme06g00938 | 772 | Gene3D | - | 638 | 769 | - | - | |
Cme06g00938 | 772 | Pfam | Peptidase inhibitor I9 | 27 | 113 | IPR010259 | - | |
Cme06g00938 | 772 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 18 | 766 | IPR045051 | - | |
Cme06g00938 | 772 | PANTHER | XYLEM SERINE PROTEINASE 1 | 18 | 766 | - | - | |
Cme06g00938 | 772 | CDD | Peptidases_S8_3 | 110 | 587 | IPR034197 | - | |
Cme06g00938 | 772 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 109 | 621 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g02092 | Cme-Chr3:28252992 | Cme06g00938 | Cme-Chr6:6569971 | 0 | dispersed | |
Cme06g00938 | Cme-Chr6:6569971 | Cme11g00387 | Cme-Chr11:3917870 | 0 | dispersed | |
Cme06g00938 | Cme-Chr6:6569971 | Cme08g00624 | Cme-Chr8:4015273 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g00938 | - | - | csv:101214825 | 1449.88 |