Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00951 ATGGCAAAAAATGCATCACTTTTGTTTCTAATTATGATGGTGTGTCTGTCGGAAGGAGTTCTTGATAGCCACTATTACTTAAAAACATGCCCCAATGCAGAAAATATCATTCTTCAAACCGTCTACAATGCTTCCATTCATGATCCCAAAGTCCCTGCTCGTCTTCTTAGGCTCTTCTTTCATGACTGTTTCATAAGGGGATGTGATGGATCGGTGTTGATAGACTCGACACCTGAGAACCAAGCAGAGAAAGATGGACCTCCAAACATCTCGCTAAGGTCATTCTATGTGATAGATGAGGCCAAAGCTAAGCTTGAAAGTGCATGCCCACATACTGTTTCTTGTGCTGATATTGTCGCTATTGCTGCTAGAGATGTAGTAACTTTGTCTGGAGGCCCATATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCAAAGGCTTCTGAGACCATCAACTTGCCAGCTCCAACTTTCAATGTCTCCCAACTCATTCAGAGCTTTGCAGACAGAGGATTAGAAGTTAAGGACATGGTTGCTCTATCTGGGGCTCACACACTTGGATTCTCACATTGTTCTTCCTTCCAATCTCGACTTCGAAACTTCAGCTCAACTCATGAAATTGATCCTACTTTGGAATCTGGGTTTGCTCAAATTCTAAGAAACAAGTGTCCAAAACCAAATTTGGACAAAAATGCTGGACAGTTCTTGGACCCAACTTCCTCAACTTTTGACAATGTGTATTACAAGAGACTGTTGGAAGGAAAGGGTGTGTTTGGTTCTGATCAAGCTCTGTTTGTTGATTCTAGAACTAGAGGGCTTGTTGGGCAGTTTGCTCAAGATCAGAACTTGTTCTTTAAGGAGTTTGCAGCTTCAATGGTGAATTTGGGTAATGTTGGGGTAATTCAGAATGGAAATATCAGAATCAATTGCCGGGTGCCAAACTAA 951 41.75 MAKNASLLFLIMMVCLSEGVLDSHYYLKTCPNAENIILQTVYNASIHDPKVPARLLRLFFHDCFIRGCDGSVLIDSTPENQAEKDGPPNISLRSFYVIDEAKAKLESACPHTVSCADIVAIAARDVVTLSGGPYWSVLKGRKDGKISKASETINLPAPTFNVSQLIQSFADRGLEVKDMVALSGAHTLGFSHCSSFQSRLRNFSSTHEIDPTLESGFAQILRNKCPKPNLDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQALFVDSRTRGLVGQFAQDQNLFFKEFAASMVNLGNVGVIQNGNIRINCRVPN 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6760364 6762726 - MELO3C006862.2.1 Cme06g00951 330100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00951 316 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PANTHER PEROXIDASE 25-RELATED 8 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 Gene3D - 24 316 - -
Cme06g00951 316 PANTHER PEROXIDASE 66 8 314 - -
Cme06g00951 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Cme06g00951 316 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 Gene3D Peroxidase, domain 2 156 297 - -
Cme06g00951 316 SUPERFAMILY Heme-dependent peroxidases 21 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 CDD secretory_peroxidase 21 314 IPR033905 GO:0004601|GO:0042744
Cme06g00951 316 Pfam Peroxidase 44 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme06g00951 316 ProSiteProfiles Plant heme peroxidase family profile. 20 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00951 Cme-Chr6:6760364 Cme08g00959 Cme-Chr8:6309820 1.38E-118 dispersed
Cme08g02562 Cme-Chr8:32919372 Cme06g00951 Cme-Chr6:6760364 3.44E-81 dispersed
Cme06g00951 Cme-Chr6:6760364 Cme11g00772 Cme-Chr11:9621554 2.66E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00951 K00430 - csv:101210306 607.446