Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g00971 | ATGGCATCTTCTCGTCTGACAGGAGGATTAGCTCAGTCTCCATCGAGTTCTGGGATTTTCTTCCAAGGAGAAGGGCAGTCCCCGGCTATTGTTAATTCTCATTTGAGCCAATCATTTGCAAATTCATCAAATTCAATTCCAGGAACTGGATGTTCTGATTTTGGTCCTGTTTCCGGAGATATGAACAATGCAGTTTTAGAAAGTGTGGCTAATTCAGGACCCAGTGTGGGTGCAAGTTCATTAGTTACAGATGCAAACTCCGCTCTTTCAGGGGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCGTACATGCGCTTGCCTGCATCGCCTATGTCATTCAATTCAAATAACATTAGTGTGTCAGGGTCCTCAGTTATAGATGGATCCTGCGTTGTGCAGCAAAATTCTCAACAGGACCAAAATATCCAACACGTGCCGCAACAGGCACAGCAGGGTGCTTCACATGCCACATCCTTACCAACACCACAAATAGGCCAAACATCACTTCCGATGGGCACCAAACATCAGGGATCTTTCATTCCAGATCCAAATAGTTATTCCCAGGTGCAGAAGAAACCACGACTGGATTTAAAGCCGGAAGATGTGCTGCAACAGCAAGTTTTGCAGCAGCTATTTCAGAGACAGGATTCCATGCAGTCACAAAACCGTAACTCACAGTTACAAGCTTTATTTCAGCAGCAAAGAATGCGGCAGCAGCAGCAGATTTTGCAGTCTCTACCTCAGTACAGGGCTCAGTTTCAGCAACAGCAGCAGATACAGTTGAGGCAGCAAATGCAACAGCAGGCAATGCAACCTGTATCGCCCATAAAGCGGCCCCCATATGATGCTGGTGGTGTTTGTGCTCGCCGGCTGATGCAATATTTATACCATCAGCGGCAAAGACCTCCCGAGAATAGTATAGCCTACTGGAGAAAGTTTGTAGCAGAGTATTACTCTCCTCGTGCAAAGAAAAGATGGTGCTTGTCATTGTATGAGAATGTTGGCCACCATGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGATGCGTGGCAGTGTGACATCTGCGGTTCTAAATCAGGAAGGGGATTTGAGGCTACATTTGAAGTACTCCCGAGACTCAGCGAGATCAAATTTGGAAGTGGAGTTATTGATGAGCTTTTATTTCTGGACCTTCCTCAAGAAAGGAGATTTGCTTCTGGAATTATGATGTTAGAATATGGAAAAGCAATTCAAGAGAGTGTATATGAGCAACTTCGAGTCATTCGTGAGGGTCAGCTTCGTATCATATTCACACAAGACTTGAAGATTTTGTGTTGGGAATTTTGCGCTCGGCGTCATGAAGAACTTCTTCCACGGAGGCTGGTTGCACCTCAGGTGAATCAGCTGGTACAGGTTGCCCAGAAATGCCAAAGCACAATAGCTGAAAGTGGGCCTGATGGTGTTTCTCAGAAAGATTTGCAGACAAATAGCAATATGGTACTGACAGCTGGTCGTCAGCTTGCTAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCTCGAAAAGATACGTGCGGTGTCTGCAGATATCGGAGGTTGTCAACAGTATGAAAGATCTGATTGGTTTCTGCCGGGATCAAAAAGTTGGGCCTATTGAGGGCTTGAAGAACTATCCTAGACATGCCACTGCAGCCAAGCTCCAAATGCAAAAAATGCAGGAGATGGAACAGTTAGCGAGTATTCAAGGTCTTCCCACAGACCGCAACACAATTAATAAGCTGATGACATTGCATCCTGAACTTGATAACCATGGGATGAATAACCATCAGATGATTGGTCGGGGAGGTTTCAGTGGTTCAGCACAAGCTGCTTTGGCAATGACTACATACCAGAATATCCTCATGAGACAGAACTCTATGAACTCGAACCCCAGCCCACATCAACAGGAGGCCTCCTCCTCTTTCAATAACTCCAACTATAATCCATCCCCTACTCTTCAGGGGACTACATCCCTGATGCCTGGCCCCGTGCAGACCTCCTCTGTTGGTGGTTTTCCAGGCACCCAGCCACCCTTGCAAAAGCAATTGCAGCCACCGCTGCAACAGCATCCGCCAAATGCTGGAACCTTGGTCCAACAAAATCATCCTCAGATGATGCAAGGTAGCCAGGCGATACAACAACAGATGATCCAGCAACTTTTGCAGATGTCAAATAACAGTAAGAGTGGGAGTTTACAACAGCAACCCCTTACTGGACCAAATGCAAATAGAAGTATACCTAGAAGGGGTATGTCTTATGTAGGTAACACCTCAGTTCCAGCTGGGGCATCTGGAAATCTATCTGGTAGCAACGTTCCTGCTCCAAGTAGGAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAATCCTCTGCTGGTAACAGTGGATTTGATCAAAAGGCTTCTGATCTGCCGCAACAATTACATTTTCCCGAGAGTTTGGTTGAAGATATAGGCCAAGATTTTCCTGAAAGCGGCTTTATTAACAATGAGCTTGATGAGGATTTGGGTTATGTG | 2544 | 45.99 | MASSRLTGGLAQSPSSSGIFFQGEGQSPAIVNSHLSQSFANSSNSIPGTGCSDFGPVSGDMNNAVLESVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSQQDQNIQHVPQQAQQGASHATSLPTPQIGQTSLPMGTKHQGSFIPDPNSYSQVQKKPRLDLKPEDVLQQQVLQQLFQRQDSMQSQNRNSQLQALFQQQRMRQQQQILQSLPQYRAQFQQQQQIQLRQQMQQQAMQPVSPIKRPPYDAGGVCARRLMQYLYHQRQRPPENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFLDLPQERRFASGIMMLEYGKAIQESVYEQLRVIREGQLRIIFTQDLKILCWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGPDGVSQKDLQTNSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLASIQGLPTDRNTINKLMTLHPELDNHGMNNHQMIGRGGFSGSAQAALAMTTYQNILMRQNSMNSNPSPHQQEASSSFNNSNYNPSPTLQGTTSLMPGPVQTSSVGGFPGTQPPLQKQLQPPLQQHPPNAGTLVQQNHPQMMQGSQAIQQQMIQQLLQMSNNSKSGSLQQQPLTGPNANRSIPRRGMSYVGNTSVPAGASGNLSGSNVPAPSRSNSFKAASNSESSAGNSGFDQKASDLPQQLHFPESLVEDIGQDFPESGFINNELDEDLGYV | 848 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6902210 | 6908243 | + | MELO3C006880.2.1 | Cme06g00971 | 330120 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g00971 | 848 | MobiDBLite | consensus disorder prediction | 635 | 709 | - | - | |
Cme06g00971 | 848 | MobiDBLite | consensus disorder prediction | 736 | 752 | - | - | |
Cme06g00971 | 848 | MobiDBLite | consensus disorder prediction | 736 | 848 | - | - | |
Cme06g00971 | 848 | PANTHER | LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED | 5 | 147 | - | - | |
Cme06g00971 | 848 | PANTHER | LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED | 184 | 843 | - | - | |
Cme06g00971 | 848 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cme06g00971 | 848 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 5 | 147 | IPR029005 | - | |
Cme06g00971 | 848 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 184 | 843 | IPR029005 | - | |
Cme06g00971 | 848 | MobiDBLite | consensus disorder prediction | 138 | 193 | - | - | |
Cme06g00971 | 848 | MobiDBLite | consensus disorder prediction | 767 | 811 | - | - | |
Cme06g00971 | 848 | Pfam | LIM-domain binding protein | 293 | 553 | IPR029005 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cme06g00971 | Cme09g01449 | CCT | |
Cme06g00971 | Cme09g01449 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g00586 | Cme-Chr3:9213697 | Cme06g00971 | Cme-Chr6:6902210 | 3.27E-114 | dispersed | |
Cme06g00971 | Cme-Chr6:6902210 | Cme09g01449 | Cme-Chr9:19708414 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g00971 | - | - | csv:105434391 | 1475.3 |