Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g00971 ATGGCATCTTCTCGTCTGACAGGAGGATTAGCTCAGTCTCCATCGAGTTCTGGGATTTTCTTCCAAGGAGAAGGGCAGTCCCCGGCTATTGTTAATTCTCATTTGAGCCAATCATTTGCAAATTCATCAAATTCAATTCCAGGAACTGGATGTTCTGATTTTGGTCCTGTTTCCGGAGATATGAACAATGCAGTTTTAGAAAGTGTGGCTAATTCAGGACCCAGTGTGGGTGCAAGTTCATTAGTTACAGATGCAAACTCCGCTCTTTCAGGGGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCGTACATGCGCTTGCCTGCATCGCCTATGTCATTCAATTCAAATAACATTAGTGTGTCAGGGTCCTCAGTTATAGATGGATCCTGCGTTGTGCAGCAAAATTCTCAACAGGACCAAAATATCCAACACGTGCCGCAACAGGCACAGCAGGGTGCTTCACATGCCACATCCTTACCAACACCACAAATAGGCCAAACATCACTTCCGATGGGCACCAAACATCAGGGATCTTTCATTCCAGATCCAAATAGTTATTCCCAGGTGCAGAAGAAACCACGACTGGATTTAAAGCCGGAAGATGTGCTGCAACAGCAAGTTTTGCAGCAGCTATTTCAGAGACAGGATTCCATGCAGTCACAAAACCGTAACTCACAGTTACAAGCTTTATTTCAGCAGCAAAGAATGCGGCAGCAGCAGCAGATTTTGCAGTCTCTACCTCAGTACAGGGCTCAGTTTCAGCAACAGCAGCAGATACAGTTGAGGCAGCAAATGCAACAGCAGGCAATGCAACCTGTATCGCCCATAAAGCGGCCCCCATATGATGCTGGTGGTGTTTGTGCTCGCCGGCTGATGCAATATTTATACCATCAGCGGCAAAGACCTCCCGAGAATAGTATAGCCTACTGGAGAAAGTTTGTAGCAGAGTATTACTCTCCTCGTGCAAAGAAAAGATGGTGCTTGTCATTGTATGAGAATGTTGGCCACCATGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGATGCGTGGCAGTGTGACATCTGCGGTTCTAAATCAGGAAGGGGATTTGAGGCTACATTTGAAGTACTCCCGAGACTCAGCGAGATCAAATTTGGAAGTGGAGTTATTGATGAGCTTTTATTTCTGGACCTTCCTCAAGAAAGGAGATTTGCTTCTGGAATTATGATGTTAGAATATGGAAAAGCAATTCAAGAGAGTGTATATGAGCAACTTCGAGTCATTCGTGAGGGTCAGCTTCGTATCATATTCACACAAGACTTGAAGATTTTGTGTTGGGAATTTTGCGCTCGGCGTCATGAAGAACTTCTTCCACGGAGGCTGGTTGCACCTCAGGTGAATCAGCTGGTACAGGTTGCCCAGAAATGCCAAAGCACAATAGCTGAAAGTGGGCCTGATGGTGTTTCTCAGAAAGATTTGCAGACAAATAGCAATATGGTACTGACAGCTGGTCGTCAGCTTGCTAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCTCGAAAAGATACGTGCGGTGTCTGCAGATATCGGAGGTTGTCAACAGTATGAAAGATCTGATTGGTTTCTGCCGGGATCAAAAAGTTGGGCCTATTGAGGGCTTGAAGAACTATCCTAGACATGCCACTGCAGCCAAGCTCCAAATGCAAAAAATGCAGGAGATGGAACAGTTAGCGAGTATTCAAGGTCTTCCCACAGACCGCAACACAATTAATAAGCTGATGACATTGCATCCTGAACTTGATAACCATGGGATGAATAACCATCAGATGATTGGTCGGGGAGGTTTCAGTGGTTCAGCACAAGCTGCTTTGGCAATGACTACATACCAGAATATCCTCATGAGACAGAACTCTATGAACTCGAACCCCAGCCCACATCAACAGGAGGCCTCCTCCTCTTTCAATAACTCCAACTATAATCCATCCCCTACTCTTCAGGGGACTACATCCCTGATGCCTGGCCCCGTGCAGACCTCCTCTGTTGGTGGTTTTCCAGGCACCCAGCCACCCTTGCAAAAGCAATTGCAGCCACCGCTGCAACAGCATCCGCCAAATGCTGGAACCTTGGTCCAACAAAATCATCCTCAGATGATGCAAGGTAGCCAGGCGATACAACAACAGATGATCCAGCAACTTTTGCAGATGTCAAATAACAGTAAGAGTGGGAGTTTACAACAGCAACCCCTTACTGGACCAAATGCAAATAGAAGTATACCTAGAAGGGGTATGTCTTATGTAGGTAACACCTCAGTTCCAGCTGGGGCATCTGGAAATCTATCTGGTAGCAACGTTCCTGCTCCAAGTAGGAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAATCCTCTGCTGGTAACAGTGGATTTGATCAAAAGGCTTCTGATCTGCCGCAACAATTACATTTTCCCGAGAGTTTGGTTGAAGATATAGGCCAAGATTTTCCTGAAAGCGGCTTTATTAACAATGAGCTTGATGAGGATTTGGGTTATGTG 2544 45.99 MASSRLTGGLAQSPSSSGIFFQGEGQSPAIVNSHLSQSFANSSNSIPGTGCSDFGPVSGDMNNAVLESVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSQQDQNIQHVPQQAQQGASHATSLPTPQIGQTSLPMGTKHQGSFIPDPNSYSQVQKKPRLDLKPEDVLQQQVLQQLFQRQDSMQSQNRNSQLQALFQQQRMRQQQQILQSLPQYRAQFQQQQQIQLRQQMQQQAMQPVSPIKRPPYDAGGVCARRLMQYLYHQRQRPPENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFLDLPQERRFASGIMMLEYGKAIQESVYEQLRVIREGQLRIIFTQDLKILCWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGPDGVSQKDLQTNSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLASIQGLPTDRNTINKLMTLHPELDNHGMNNHQMIGRGGFSGSAQAALAMTTYQNILMRQNSMNSNPSPHQQEASSSFNNSNYNPSPTLQGTTSLMPGPVQTSSVGGFPGTQPPLQKQLQPPLQQHPPNAGTLVQQNHPQMMQGSQAIQQQMIQQLLQMSNNSKSGSLQQQPLTGPNANRSIPRRGMSYVGNTSVPAGASGNLSGSNVPAPSRSNSFKAASNSESSAGNSGFDQKASDLPQQLHFPESLVEDIGQDFPESGFINNELDEDLGYV 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6902210 6908243 + MELO3C006880.2.1 Cme06g00971 330120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g00971 848 MobiDBLite consensus disorder prediction 635 709 - -
Cme06g00971 848 MobiDBLite consensus disorder prediction 736 752 - -
Cme06g00971 848 MobiDBLite consensus disorder prediction 736 848 - -
Cme06g00971 848 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 147 - -
Cme06g00971 848 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 184 843 - -
Cme06g00971 848 MobiDBLite consensus disorder prediction 1 22 - -
Cme06g00971 848 PANTHER LIM DOMAIN-BINDING PROTEIN 5 147 IPR029005 -
Cme06g00971 848 PANTHER LIM DOMAIN-BINDING PROTEIN 184 843 IPR029005 -
Cme06g00971 848 MobiDBLite consensus disorder prediction 138 193 - -
Cme06g00971 848 MobiDBLite consensus disorder prediction 767 811 - -
Cme06g00971 848 Pfam LIM-domain binding protein 293 553 IPR029005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme06g00971 Cme09g01449 CCT
Cme06g00971 Cme09g01449 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00586 Cme-Chr3:9213697 Cme06g00971 Cme-Chr6:6902210 3.27E-114 dispersed
Cme06g00971 Cme-Chr6:6902210 Cme09g01449 Cme-Chr9:19708414 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g00971 - - csv:105434391 1475.3