Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01006 ATGGAGTTGATTTGTGTGTTGATTATGTTAATCAAGTGGATGATTAGGGTTTCAATTATGGTATTGTTTGGGAAAGTGGTGATTTCATGCTGGATTTTGCCAATTTTGGCTCATAGAAAATTGAAGAGAAATGGATTTGAAGGCCCTTCTCCTAGTTTCCCTCTTGGGAATATTACAGAAATGAAGAAGATAATGAAAGCTGCTGCTGCTGCTACTGCTGTCACTAATGGATCATCATCAAATAATTTGTCCCATGATATTCATTCAACTATTTTCCCTCACTTTGCTCAATGGCAGAATTCTTATGGGAAGAAGTTTGTATATTGGTTGGGGACAGAGCCATTTCTGTACATAGCAGATCCACAGCTTGTGAAGAAGATATCCGAAGCTGTATTGGGTAAGAGCTGGGGGAAGCCAGCAGTCTTTAGAAATGACCGAGAACCCATGTTTGGCGATGGCCTTGTCATGACTGAGGGAGACAACTGGATTCGCCATCGCCATATCCTCACTCCTGCCTTCAACCCTACCAATCTGAAGGCAATGACAAAATTCATGGTGGAGTCGACGACAAAAATGCTAGAAGAATGGAGAAGCCTAGTAAAATCAGGGCAGTCAGAAATAGAGGTGGAAAGACAAATAACCGCCACCGCGGGCGAAATAATAGCAAAAGCAAGCTTTGGAATATCCAACTGCGGCGGCGGTGGAGAAGCATTGAACAACCTGAGAGCATTACAGTTAACTCTTTTCAAGAACAGTAGCTACGTGGGGGTCCCATTCAGCAGCCTATTTCTTTACCCAGCCCGAACCCTAGCCGCCAAGCGACTGGGAGCTCAAATCGACCGCCTGTTTTTGTCCATCATATCTAATAGGAAAATGTCGGGTTCGGGATCGGGATATTCGGATTTGCTGAGCCGGTTGATTGGGAGTGAGTATACGGGCGGGGAGGCGCTGAGTCCGAGAGAAGTGGTGGATGAGTGTAAGACTTTTTTCTTTGGGGGACATGAGACCACGGCGCTGGCTATTAGTTGGACGTTGCTGTTGTTGGCGACGTCTCCCGATTGGCAAAGGATTTTGCGAGAGGAGATTAAAGAAGTGGTTGGTGATAAAGATATTGATTTCTCCATGCTTTCTTCCCTCAAAAAGATGGGATGGGTATGGAATGAGGTACTTAGACTATACCCCTCAGCTCCAAACATACAAAGACAAGCAAAAGGAGACATTGATTTAGGGGACATAAAGATCCCAAAGGGGACCAACATATGGATAGACGTTGTTGCAATGCATCACGACCCGACCCTATGGGGCGACGACGTTAACGACTTCAATCCTAGCAGGTTCCAACACGACACCATTCATGGCGGATGCTACCACAAAATGGGATATTTGCCTTTCGGCTTTGGAGGGAGAATGTGCATTGGTAGAAACTTATCTTCTATGGAGTATAAGATCGTCCTAACCCTAATTCTTTCTACCTTTTCACTCTCACTTTCCCCCTCTTACTCCCATTCTCCTGCTACTTTACTCTCTTTGAGGCCCGCCCATGGCATTCCCCTCATTCTAACCCCTCTTCAACCTTAA 1578 45.37 MELICVLIMLIKWMIRVSIMVLFGKVVISCWILPILAHRKLKRNGFEGPSPSFPLGNITEMKKIMKAAAAATAVTNGSSSNNLSHDIHSTIFPHFAQWQNSYGKKFVYWLGTEPFLYIADPQLVKKISEAVLGKSWGKPAVFRNDREPMFGDGLVMTEGDNWIRHRHILTPAFNPTNLKAMTKFMVESTTKMLEEWRSLVKSGQSEIEVERQITATAGEIIAKASFGISNCGGGGEALNNLRALQLTLFKNSSYVGVPFSSLFLYPARTLAAKRLGAQIDRLFLSIISNRKMSGSGSGYSDLLSRLIGSEYTGGEALSPREVVDECKTFFFGGHETTALAISWTLLLLATSPDWQRILREEIKEVVGDKDIDFSMLSSLKKMGWVWNEVLRLYPSAPNIQRQAKGDIDLGDIKIPKGTNIWIDVVAMHHDPTLWGDDVNDFNPSRFQHDTIHGGCYHKMGYLPFGFGGRMCIGRNLSSMEYKIVLTLILSTFSLSLSPSYSHSPATLLSLRPAHGIPLILTPLQP 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7225797 7230510 + MELO3C006916.2.1 Cme06g01006 330155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01006 525 Gene3D Cytochrome P450 33 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01006 525 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 14 519 - -
Cme06g01006 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 519 - -
Cme06g01006 525 Pfam Cytochrome P450 90 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01006 525 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01006 525 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01006 525 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01006 525 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01006 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Cme06g01006 525 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01006 525 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01006 525 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme06g01006 525 SUPERFAMILY Cytochrome P450 88 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme06g01006 Cme09g01553 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01006 Cme-Chr6:7225797 Cme09g01553 Cme-Chr9:20537686 0 dispersed
Cme06g01006 Cme-Chr6:7225797 Cme05g01942 Cme-Chr5:28013128 1.24E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01006 - - csv:101220942 977.622