Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01008 ATGAGTCCGACCGCCGTCGAAGCTCCATTACTTCTTCTTTTTCTTCTTGCTGCAGCGCTTCTGTGCCCGCTCGGCGGAGCCAGACTTCTGGTGGAGATGACGGTGGTCCGAAACGCCTCTTCCATCGGAGCTTTTTGTTTGGACGGAAGCTTGCCGGCGTATCATCTGGACAGAGGATTCGGCGCCGGAGCGGGAAACTGGCTTCTACAGTTCGAGGGTGGTGGGTGGTGCAATGATGTAAAGTCTTGTTTTGAGAGAGCAAATAGTCGAAGAGGATCAACACATTTGATGACCAAATGGGAAGATTTTTCTGGTATTCTTAGCAACAATGCTTCTCTTAACCCAGACTTTTATAATTGGAACCGTGTGAAACTCAGGTATTGTGATGGAGCCTCATTTGCCGGAGATGCCTTGTTTGATAATGGGACATCAGTGCTTCATTTCAAAGGGCAAAAGATGTGGGAATCCATCATTCTTGACCTTCTACCAAAAGGGTTGGGGACAGCAAGGAAGGCTCTGCTTTCTGGTTGCTCTGCTGGAGGTTTAGCAACTTTTCTGCATTGTGAAAATTTCACTAATTATTTGCCAAGAAATGCAAGTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTCGACTTAAGAGACATAGGTTTAAATCACACCATGAGGAACTTTTATAAGGATCTTGTGTCTCTTCAGGGAATGGAGCAAAATCTGAATAAAAACTGCACAGCCTCCTCTTACTTTCCAGAATTGTGTATATTCCCTCAATATTCTTTGAAGTACATAACAACACCATTTTTCATTCTCAATTCAGCATATGATGTTTTCCAATTTCATCATGGGTTGGTGCCACCATCTGCTGATTTACATGGACATTGGAACCATTGCAAATTAAATCCAGCAGAGTGTAGTGAACTACAGATTCAGGTACTGCAAGGTCTAAGAATCAGTATGCTCTCAGCATTAAGATTATTCCATGAATATTCAAGCAGAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCACAAGACACATGGTTTGCACCTGACTCCCCAACAATAGACAACAAGACGATAGCAGAATCAGTTGGTGATTGGTACTTTGGCAGGAGAAACGTAAAGGAAATTGACTGTGCTTATCCATGTGATTCTACTTGCCACAATCTCATACCATAA 1194 42.8 MSPTAVEAPLLLLFLLAAALLCPLGGARLLVEMTVVRNASSIGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVKSCFERANSRRGSTHLMTKWEDFSGILSNNASLNPDFYNWNRVKLRYCDGASFAGDALFDNGTSVLHFKGQKMWESIILDLLPKGLGTARKALLSGCSAGGLATFLHCENFTNYLPRNASVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVSLQGMEQNLNKNCTASSYFPELCIFPQYSLKYITTPFFILNSAYDVFQFHHGLVPPSADLHGHWNHCKLNPAECSELQIQVLQGLRISMLSALRLFHEYSSRGGMFINSCFAHCQSESQDTWFAPDSPTIDNKTIAESVGDWYFGRRNVKEIDCAYPCDSTCHNLIP 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7237982 7246131 - MELO3C006917.2.1 Cme06g01008 330157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01008 397 PANTHER PECTIN ACETYLESTERASE 9 27 397 - -
Cme06g01008 397 Pfam Pectinacetylesterase 28 377 IPR004963 GO:0016787
Cme06g01008 397 PANTHER NOTUM-RELATED 27 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01008 Cme-Chr6:7237982 Cme08g02404 Cme-Chr8:30938790 1.61E-142 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01008 K19882 - csv:101216160 795.038