Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01033 AACAAAGCTCCTCATTTTTTCCTTCTCATTCTAATTTTTCTCCCACACTCAGAACTGAATAAAAAGAAAAACAAAAACAAACTTGTGGCCTCTGTTCCTTCGACCTCCATTTTTATACCCCTCTCTCCGCCGTCCCTTTCTCCGAGAACCTTCCTCTTCTTCCACTCTCTTTTCACTTTTCACCCCTTCTTCTCTCCCATGGCGGCCGCCCTCTCCGCCGCCTTACTCCCCAAACCATTCCATCTCTTCCTCTCTTCCTCCCATCTCTCCCTTAAACCTCCGACCCCCTTTCTTTTTCCACCTTCTGTCTTCCCGAACAGTAGATTCCAATGGAAGATGCGGAGAAAAACTCTGCTCACTGTCTGCGTACTCGTTGAGGATCAAAATAGTTCCGGCGAGGTACACAGTCTCTCCGATGAAGAATCGCCGATTGTAGTTCCTCAGATCCCATCGCCTCACGTTTCCGAAAGATTAGCTAGGAAGAAATCGGAGCGTTTCACTTATCTTGTTGCTGCGATTATGTCTAGTTTCGGAATTACATCCATGGCTGTCATGGCGGTTTATTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCTGTTGGTGCCGCTGTCGGCATGGAGTTCTGGGCAAGATGGGCTCATAGAGCTCTCTGGCACTCTTCCTTATGGCATATGCACGAGTCGCATCATAAACCAAGAGAAGGACCATTCGAACTGAACGATATTTTCGCCATAATCAACGCTGTGCCGGCCATAGCACTTCTTTCTTACGGCTTCTTCCATAAAGGGCTTGTTCCTGGACTCTGCTTTGGCGCAGGTCTTGGAATTACGGTCTTTGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCACAAAAGATTCCCTGTGGGTCCCATTGCCAACGTCCCTTACTTCAGAAAGGTTGCTGCTGCTCACCAGCTTCACCATTCGGACAAGTTCAATGGTGTCCCATACGGGCTTTTTTTAGGTCCCAAGGAACTAGAGGAAGTGGGAGGCTTAGAAGAATTGGAGAAGGAAATCAACCGAAGAATAAAATGGACGGCGCCAAAATCAAACTATGGTTCTTGA 1131 47.57 NKAPHFFLLILIFLPHSELNKKKNKNKLVASVPSTSIFIPLSPPSLSPRTFLFFHSLFTFHPFFSPMAAALSAALLPKPFHLFLSSSHLSLKPPTPFLFPPSVFPNSRFQWKMRRKTLLTVCVLVEDQNSSGEVHSLSDEESPIVVPQIPSPHVSERLARKKSERFTYLVAAIMSSFGITSMAVMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHSSLWHMHESHHKPREGPFELNDIFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEINRRIKWTAPKSNYGS 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7484198 7487225 + MELO3C006938.2.1 Cme06g01033 330182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01033 376 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 83 368 IPR045019 GO:0016491
Cme06g01033 376 Pfam Fatty acid hydroxylase 215 342 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cme06g01033 376 PANTHER BETA-CAROTENE HYDROXYLASE 83 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01033 Cme-Chr6:7484198 Cme09g01790 Cme-Chr9:22323835 8.06E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01033 K15746 - csv:101212140 580.867