Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01069 ATGGCAATTGCCGTGCTCGATGCCCTCGACAACGCTCGGACACAATGGTACCATATTACGGCCATAGTCATAGCCGGGATGGGCTTTTTCACAGATGCCTACGATCTTTTCTGCATCTCAACCGTGTCGAAGCTTCTCGGTCGACTTTATTACTTCAATCCAGATAGTACTAAGCCGGGAAAACTTCCGAACCAAATCAACAACGCGGTTGTGGGAGTTGCGTTGGTCGGAACCCTAATGGGACAACTTTTCTTTGGGTGGTTGGGTGATAAACTTGGAAGGAAGAAAGTTTACGGTGTTACCCTAGTTCTTATGGCTTTTTGTGCCATTTGCTCAGGGCTTTCTTTTGGGTCAACATCAAAATCAGTGATAGGTACACTTTGTTTCTTTAGATTTTGGCTTGGTTTTGGCATTGGGGGTGACTATCCACTTTCAGCCACCATCATGTCTGAATATGCTAACAAAAAGACTCGAGGAGCTTTCATTGCAGCTGTCTTTGCTATGCAGGGTATGGGGCTAATATTTGCAGGGTTGGTATCAATGATCTTATCAAAAATCTTCCTCTCCCTTCATAAAGCTCCCGCATACAAAGCTGACCATGTGTTTTCAACACAACCTGAAGGAGATTTCCTATGGAGAATAGTCCTAATGCTTGGTGCTTTACCAGCCATTTTAACTTACTATTGGAGAATGAAAATGCCTGAAACAGGACGTTACACTGCCCTAATTGAAGGTAATGCCAAACAAGCAGCTGCCGATATGGGAAAAGTTTTAGAAATTCAAATTCAAGCCGAACAAGAAAAACTTTCCAATTTCAAAGCAGCCAATGAATATGGTTTGTTATCTAAAGAGTTTTTTGATCGCCATGGACTTCATTTGATTGGAACTACCACTACTTGGTTCCTGTTGGACATTGCATTTTATAGTAATAATCTTACACAAAAAGATATATTCCCAGCTATGAATTTGACTAGGAAACCTGAGGAAATTAGTGCATTGGAAGAGGTTTATGAAACTTCTAAAGCTATGTTTCTTGTTGCTTTACTTGGAACTTTCCCTGGCTATTGGTTCACTGTGTTTCTCATTGAGAAGCTTGGAAGGTTCAAAATCCAATTGATTGGTTTCTTTATGATGTCCATTTTCATGGCCGTTCTCGGTGTTCGTTACAACTATATGAAGAATCATCCTGTCGAGTTTGCAATTCTTTATGGCTTGACGTTTTTCTTTGCCAACTTTGGTCCTAATAGTACTACCTTTGTCCTTCCTGCTGAGCTTTTCCCAACTAGGGTTCGGTCCACATGTCATGCATTAAGTGCCGCATCGGGGAAGGCTGGTGCGATCGTTGGAGCTTTCGGGGTGCAAAACTATACCCTAGATGGAAACCCTAGCAAGATTCAAAAGGCTATGATTTTCTTGGCCTTTACTAATATGCTAGGGTTTGTGTTTACGTTCTTGGTGACGGAGACGAAAGGGCGATCCTTGGAGGAGATCTCCGGTGAAGATGGGGGCAGGGAAGGTGAAAATGAAACTCATATGCCTGTGAGATCAATGGGGAAAGGTCATGAAATGGAAGGACAAAATGTATGA 1587 42.28 MAIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFNPDSTKPGKLPNQINNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLVLMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGMGLIFAGLVSMILSKIFLSLHKAPAYKADHVFSTQPEGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEIQIQAEQEKLSNFKAANEYGLLSKEFFDRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTRKPEEISALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSIFMAVLGVRYNYMKNHPVEFAILYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGGREGENETHMPVRSMGKGHEMEGQNV 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7842339 7844440 - MELO3C006975.2.1 Cme06g01069 330218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01069 528 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 3 508 - -
Cme06g01069 528 MobiDBLite consensus disorder prediction 495 518 - -
Cme06g01069 528 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
Cme06g01069 528 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 508 - -
Cme06g01069 528 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857
Cme06g01069 528 Pfam Sugar (and other) transporter 22 498 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cme06g01069 528 MobiDBLite consensus disorder prediction 495 528 - -
Cme06g01069 528 TIGRFAM 2A0109: phosphate:H+ symporter 6 500 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cme06g01069 528 CDD MFS_PhT 22 490 - -
Cme06g01069 528 Gene3D MFS general substrate transporter like domains 17 514 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g00497 Cme-Chr6:3123150 Cme06g01069 Cme-Chr6:7842339 1.08E-148 dispersed
Cme06g00498 Cme-Chr6:3137502 Cme06g01069 Cme-Chr6:7842339 0 dispersed
Cme06g01069 Cme-Chr6:7842339 Cme07g00027 Cme-Chr7:205596 1.77E-155 dispersed
Cme06g01069 Cme-Chr6:7842339 Cme05g00564 Cme-Chr5:5659701 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01069 K08176 - csv:101210631 988.408