Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01081 ATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGACATATAGGAATAATCAATAGAAGGATCCAAATCAATAATATCTGGAGGAGTTTGCCTTCCAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAATAAGTCTCATGATGATGGTAGATACAGGTGCATCTGAGAACCGTAGGCCGATTGTTGATAAGCATCCAGAGAAAGATGAAGATGGTGGCTATACAAGTGGAGGATGGAAAAGTGAAGATGGGAGACTTAGTTGGGGGTATTCAAGTTTCAGAGGAAAGAGGGCAACCATGGAAGATTTCTTTGATATTAAAATGTCGAAGGTCGATGGTCAAACTGTTTGCCTTTTTGGCATCTTTGATGGTCATGGTGGGTCCCGAGCTGCAGAGTTTTTGAAGGACCATCTCTTTGAGAATCTAATGAAGCACCCAAAATTTTTGACGGATACCAAATTGGCTATCAGTGAGACGTATCAGCAGACAGATGCTGAATTTTTAAATTCGGAAAAGGATACTTTAAGGGACGATGGCTCTACTGCTTCAACCGCTTTGCTGGTTGGCAATCATCTCTATGTTGCCAATGTTGGAGATTCACGTACTATTATATCAAAGGGAGGTGAAGCGATCCCTCTTTCTGAGGACCATAAACCAAACAGAACTGACGAGCGGAGGAGAATTGAAAATGCTGGGGGTGTTGTCATGTGGGCTGGTAAGAATTTAACGACAGTTTTGTTAATGATGTTAAGAACTGCTATCCCTGTTGGTTTTCTTGTGTATTGGCAAATGATCAGTAATAACTTGAAATAG 828 41.18 MVCSYNIRNVIAQAGHIGIINRRIQINNIWRSLPSNLGFVHTWKREYRISLMMMVDTGASENRRPIVDKHPEKDEDGGYTSGGWKSEDGRLSWGYSSFRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLTDTKLAISETYQQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGKNLTTVLLMMLRTAIPVGFLVYWQMISNNLK 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8009167 8015141 + MELO3C006983.2.1 Cme06g01081 330230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01081 275 MobiDBLite consensus disorder prediction 62 83 - -
Cme06g01081 275 CDD PP2Cc 94 241 IPR001932 -
Cme06g01081 275 Pfam Protein phosphatase 2C 96 244 IPR001932 -
Cme06g01081 275 Gene3D - 84 258 IPR036457 -
Cme06g01081 275 ProSiteProfiles PPM-type phosphatase domain profile. 92 275 IPR001932 -
Cme06g01081 275 SMART PP2C_4 82 275 IPR001932 -
Cme06g01081 275 PANTHER ALPHABET, ISOFORM E-RELATED 46 246 - -
Cme06g01081 275 SUPERFAMILY PP2C-like 88 246 IPR036457 -
Cme06g01081 275 MobiDBLite consensus disorder prediction 62 81 - -
Cme06g01081 275 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Cme06g01081 275 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 46 246 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01081 Cme-Chr6:8009167 Cme07g00150 Cme-Chr7:961248 4.44E-72 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01081 K17506 - csv:101203681 481.1