Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g01115 | CATCATTCCTTTCTTTTCTCTCCCTCTCTCTCTCTCTCTCTCTTTTCATGCATTCACTTAACAAGCTGCATCTTACTAATACCATTTAGAAAGCTCCTCCGACAACTAGACGTCCGAATGTGCGATCCAACTACCATGATTAAAACCAAGAATACTCGCCGGAGACGGCGGCTGAGAGTTCGTAAACTGAGGTACAAATGGCAGAGGAATGTGCACGCGATAGAGGAAAGTGACAGCAACGAGTTAGGCCATAATGGACCTTCCGAATCCAATTCTGATCCACTGGTACTCTCCGAGAATGAATCGATTTCGGCCTTGGATTGTGGAGTGTACAGTGAGATGTCGATTATAGGGCGGAGAAAGGAGATGGAAGATGAAGTGAGAGTGGAATTGGGATTGACGGCGATTAATGATGAAAAGTACAATTTTTTTGCAGTGTATGACGGACACGGTGGCGCTCAGGTGGCGCAGGTGTGCCGTGAACGGTTGCACCAGATTGTGGCGGAGGAGATTGTGGGTTGGGGAGAGATGGATGAGGCGGAGTGGGGGAAGTTGATGGAGAAGTGCTTTGAGAGAATGGACGACGAAGTGAACAGAGGTGCTGCTGCGATGAAGACGGTCGGCTCGGCCGTGGTTGCGGCAGTGATTGGGAATGAGGAAGTGGTGGTGGCCAATTGCGGCGATTGTCGAGCCGTTTTAGGTAGGGATGGAATTGCGCTGCCCTTGTCTGACGATCATAAGCCTGGCAGAACTGATGAGTTGAAGAGAATTGAATCTGCCGGTGGAAGGGTCATAAACTGGAATGGCTACCGGGTGCTAGGAGTTCTTGCCACTTCAAGATCCATCGGTGATGAATATCTCAAACCATTTGTTATCTCAAAACCAGAAGTGACTGTGACCAAGAGAACCGACAACGATGAGTTTCTCATACTAGGAAGTGATGGTCTATGGGATGTTGTTTCGAATGAAATTGCCTGCAACATAGTGAGGAGATGTTTTGGAGGCAAATTGAAGAGGCTTTCGTTGAAAGTAGAGAATGACAGCCATGTTGCTGAAGCTGCAGCAGTGTTGGCAGAGCTCGCGGTGGCTCGTGGAAGCAAGGACAACATCAGTGTAATAGTAGTAGATTTGAGGAAACCAAAACGTTCCTCTCCATGA | 1158 | 48.27 | HHSFLFSPSLSLSLFSCIHLTSCILLIPFRKLLRQLDVRMCDPTTMIKTKNTRRRRRLRVRKLRYKWQRNVHAIEESDSNELGHNGPSESNSDPLVLSENESISALDCGVYSEMSIIGRRKEMEDEVRVELGLTAINDEKYNFFAVYDGHGGAQVAQVCRERLHQIVAEEIVGWGEMDEAEWGKLMEKCFERMDDEVNRGAAAMKTVGSAVVAAVIGNEEVVVANCGDCRAVLGRDGIALPLSDDHKPGRTDELKRIESAGGRVINWNGYRVLGVLATSRSIGDEYLKPFVISKPEVTVTKRTDNDEFLILGSDGLWDVVSNEIACNIVRRCFGGKLKRLSLKVENDSHVAEAAAVLAELAVARGSKDNISVIVVDLRKPKRSSP | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 8480427 | 8483004 | - | MELO3C008478.2.1 | Cme06g01115 | 330264 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g01115 | 385 | SMART | PP2C_4 | 97 | 375 | IPR001932 | - | |
Cme06g01115 | 385 | Pfam | Protein phosphatase 2C | 112 | 370 | IPR001932 | - | |
Cme06g01115 | 385 | PANTHER | ALPHABET, ISOFORM E-RELATED | 69 | 379 | - | - | |
Cme06g01115 | 385 | Gene3D | - | 106 | 384 | IPR036457 | - | |
Cme06g01115 | 385 | PANTHER | PHOSPHATASE 2C FAMILY PROTEIN | 69 | 379 | - | - | |
Cme06g01115 | 385 | ProSitePatterns | PPM-type phosphatase domain signature. | 143 | 151 | IPR000222 | GO:0043169 | |
Cme06g01115 | 385 | CDD | PP2Cc | 110 | 377 | IPR001932 | - | |
Cme06g01115 | 385 | ProSiteProfiles | PPM-type phosphatase domain profile. | 110 | 377 | IPR001932 | - | |
Cme06g01115 | 385 | SUPERFAMILY | PP2C-like | 104 | 379 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g01231 | Cme-Chr4:17057698 | Cme06g01115 | Cme-Chr6:8480427 | 9.20E-68 | dispersed | |
Cme05g00390 | Cme-Chr5:3154244 | Cme06g01115 | Cme-Chr6:8480427 | 3.79E-132 | dispersed | |
Cme06g00939 | Cme-Chr6:6588261 | Cme06g01115 | Cme-Chr6:8480427 | 1.10E-55 | dispersed | |
Cme06g01115 | Cme-Chr6:8480427 | Cme10g01458 | Cme-Chr10:17809458 | 1.15E-48 | dispersed | |
Cme06g01115 | Cme-Chr6:8480427 | Cme12g00139 | Cme-Chr12:1356184 | 1.55E-80 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g01115 | K14497 | - | csv:101214188 | 605.905 |