Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g01157 | ATGGCTTTGCTGAGTCCTCGATTGCATAGATTCCGGCTAACTAAGCTCCACCATGTCTCCGCCTCCAAACCCACCAAAACAACTAAGCTCACTCTCAGAAAAAAAGCCAGATGCTGCTCTGCCATAGCTATTGATGCTCCATCTTCTTTAACAGGTGCTGCGGGAATCAGATGGGGTTCCACTACTTTGCAAGGCTTGCGGGAAGAAATGGAAGACGATGCTGTTGTGTGGTCTGATGGTTTCAATGATTTCTTGTTTGCTGCAGTGTTCGATGGCCATGGTGGCTATTCCTCTGTCAAGTTCCTCAGGGAGGAGCTGTACAAAGACTGCGTGGCAGCCCTGCAGGGCGGTCTGCTATTGAATGGAGGGGATTTTGAAGTGATAAAAGCGGCTTTGGAGAAGGCTTTTGATGATACTGATAAGAGACTACTCCTATTGCTTGAGGCAGCTGGGGAGGAAGATGAATCTGGTGCCACAGCAACCGTTGCATTCATTCGAAATGATGTGCTGTTCATTTCACATCTCGATTCTTCGAAGGGAGAGGGAGTTCTTCCTACGGTGTTATCTCGTTCTGGCGGAGCACAGGTGTTGACTAGTTCTCATCGGCCTTATGGAAATAACAGCACATCACTACAAGAGATTAGAAGAATTAGAGAAGCAGGTGGATGGTTCAATGGAGATTTGGTTACTGCATCACCAGAAATTTTCCAAGTTACACTCGGATCTAATGCTGAGTTTGTTCTGATGGCATCGGATGGCCTATGGGATTACATGAATAGCTCTGATGCGGTTGGGTTTGTTCGAAATGAACTTAGACAGCATGGCGACGTTCAGCTAGCTTGTGAAGCCCTCGCCCAAGCAGCCTTGGACAAAGGTTCACAAGACAATATCAGCATTATCATGGCTGATTTAGGGCGGACAGATTGGCAAAATTTGCCCCTTCAGCAAGACAATGTCATATTTGAACTGGCTCAAGCTTTCGCTACAATCGGACTCGTTTCGTTAGGTATTTGGTGGGCATCCTCTAGTTTCTCTCTTTAA | 1041 | 46.69 | MALLSPRLHRFRLTKLHHVSASKPTKTTKLTLRKKARCCSAIAIDAPSSLTGAAGIRWGSTTLQGLREEMEDDAVVWSDGFNDFLFAAVFDGHGGYSSVKFLREELYKDCVAALQGGLLLNGGDFEVIKAALEKAFDDTDKRLLLLLEAAGEEDESGATATVAFIRNDVLFISHLDSSKGEGVLPTVLSRSGGAQVLTSSHRPYGNNSTSLQEIRRIREAGGWFNGDLVTASPEIFQVTLGSNAEFVLMASDGLWDYMNSSDAVGFVRNELRQHGDVQLACEALAQAALDKGSQDNISIIMADLGRTDWQNLPLQQDNVIFELAQAFATIGLVSLGIWWASSSFSL | 346 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 8916370 | 8920711 | + | MELO3C019373.2.1 | Cme06g01157 | 330306 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g01157 | 346 | SUPERFAMILY | PP2C-like | 52 | 305 | IPR036457 | - | |
Cme06g01157 | 346 | Pfam | Protein phosphatase 2C | 59 | 225 | IPR001932 | - | |
Cme06g01157 | 346 | Pfam | Protein phosphatase 2C | 228 | 297 | IPR001932 | - | |
Cme06g01157 | 346 | ProSiteProfiles | PPM-type phosphatase domain profile. | 57 | 304 | IPR001932 | - | |
Cme06g01157 | 346 | Gene3D | - | 56 | 310 | IPR036457 | - | |
Cme06g01157 | 346 | ProSitePatterns | PPM-type phosphatase domain signature. | 86 | 94 | IPR000222 | GO:0043169 | |
Cme06g01157 | 346 | PANTHER | PROTEIN PHOSPHATASE 2C | 6 | 223 | IPR015655 | GO:0004722|GO:0006470 | |
Cme06g01157 | 346 | SMART | PP2C_4 | 47 | 302 | IPR001932 | - | |
Cme06g01157 | 346 | PANTHER | PROTEIN PHOSPHATASE 2C 57 | 224 | 341 | - | - | |
Cme06g01157 | 346 | PANTHER | PROTEIN PHOSPHATASE 2C | 224 | 341 | IPR015655 | GO:0004722|GO:0006470 | |
Cme06g01157 | 346 | PANTHER | PROTEIN PHOSPHATASE 2C 57 | 6 | 223 | - | - | |
Cme06g01157 | 346 | CDD | PP2Cc | 56 | 304 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g01157 | Cme-Chr6:8916370 | Cme05g01846 | Cme-Chr5:27268241 | 7.20E-25 | dispersed | |
Cme06g01157 | Cme-Chr6:8916370 | Cme01g02548 | Cme-Chr1:33435260 | 3.01E-18 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g01157 | K04457 | - | csv:101218076 | 575.089 |