Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g01197 | ATGGGTTGCGTTTGCTGTAAGCCCTCTGCTATTGAAGATAGCAAGGAAAGTCCAAGGGATAGGGTGTCAAGTAAGACCTCTTCTGACCTGCGGGTTGCAAGACTGACTTCGTCATCGAGGGAAGAAGCTTATCGAGCTAAAGATCAGTATGATGGTAATGATGCGAGAGTGACATTGATTGAAAAGCAGGTGAATGGGTCTGGTCGACTGCCAGGGGAGAATTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGACTGCTCAACATCCTTCAATGGGGAGAATTCCGAAGGCAGCAGAGGGAGACCACATTGCTGCAGGGTGGCCGCCATGGCTGGCTGCAGTTGCAGGAGAGGCAATCAGAGGATGGCTACCCCGACGAGCTGATTCTTTTGAGAAATTGGATAAAATTGGCCAAGGGACTTATAGTAATGTATATAGGGCTCGGGATCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGGTTTGACAATCTGGAACCTGAGAGCGTTCGCTTTATGGCTAGGGAAATTCACATATTGCGTAGACTTGATCATCCAAATGTAATAAAGTTGGAGGGTCTAGTTACATCTCGGATGTCTTGCAGCCTCTATCTTGTTTTTGAGTACATGGAACATGACCTGGCAGGACTTGCATCACACCCTGGTGTGAAGTTTACAGAGGCGCAGGTTAAATGTTACATGCAGCAACTTTTATGTGGACTTGATCATTGTCACAGTCATGGAGTTCTACATCGTGATATAAAGGGTTCCAACCTTTTAATTGACAATCATGGTGTCTTGAAAATTGCAGACTTTGGTCTAGCAAGCTTTTTTGATATCCATCAAAATCAGCCTCTGACTAGTCGGGTTGTAACTCTTTGGTATCGACCACCTGAGCTTTTACTTGGTGCCACTTATTACGGTACAGCTGTAGATTTGTGGAGTACTGGCTGCATACTTGCTGAATTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACGGAGGTGGAACAGCTACATAAAATATTTAAACTCTGTGGCTCTCCTTCGGAGGATTATTGGAGGAAATCAAGGTTGCCTCATGCAACGATATTTAAGCCCCAACAACCATATAGACGTTGTGTTGCAGACACATTTAAGGATTTTCCTGCACCTGCTTTAGCTCTCATTGAGACCTTGCTCTCTATAGATCCTGCAGATCGTGGCTCTGCTGCTCTCGCCCTTAAAAGTGAATTTTTTTCAACAAAGCCACTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCAAGCAAAGAATTTGATGCCAAAATAAGGGATGAGGAAGCTAGAAGACAAGGAGCAGTAGGAAGCAAGGGACACCGGCTTGACTTGCAACGAAAAGATAGGGATTCTCGAGCCGTCCCTGCACCTGATGCCAATGCTGAATTAGCCTCATCAATGCAGAAAAGACAAGGCCTGTCCAGTTCAAAGAGCCGGAGTGAGAAGTTTAACCCACATCCAGAAGAAGCTTCTGGCTTTCCAATTGATCCACCTAGACCTTCACAAGGAGCAGAAAGAATGGATTCTCAGGTGCGTCATCCTAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCTGCTTGGGCGAAAGCTAATAGGAACCCAGATGAACCTCCCAAAATTTCAACCGGGACCGAAACTTTTGCAACTTCAGGACTAGTAGCAGCTAGAAGAAGTATGCTGGCTGAAGATTGTAGGGAAAAATCTGATTCTTCACAAGGAGAGGTTCAAAAGCTAATTGGTAGGTTTCCCGGTTCCTTCAAAGAAACCTCAGAGTCGTCAATGCTACCGGACCAGAAGTTCTCAAATCACAGTATTGCAGGCTCACACGATAAAGAGAGGAGCAGCACTAAAGACCCTATAGTTGTGGGTTATGGCTCGAAGGGTCATAAGATTCATTATTCTGGTCCATTACTGGTTCCTTCCGGTAACATGGACCAAATGTTGAAGGACCACGACCGCCATATCCAAGAAGCAGTAAGACGAGCTCGGCTTGACAAGGCTAAGGTAAGGAAGATTCAAGCTGACGGGAAACAGGTGTCGACAAATTCATTATTCGTCTCAGGTCGTTAA | 2124 | 45.53 | MGCVCCKPSAIEDSKESPRDRVSSKTSSDLRVARLTSSSREEAYRAKDQYDGNDARVTLIEKQVNGSGRLPGENFERKREKMEHMTAQHPSMGRIPKAAEGDHIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLCGLDHCHSHGVLHRDIKGSNLLIDNHGVLKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIETLLSIDPADRGSAALALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGAVGSKGHRLDLQRKDRDSRAVPAPDANAELASSMQKRQGLSSSKSRSEKFNPHPEEASGFPIDPPRPSQGAERMDSQVRHPKKASHSGPLAQRAAWAKANRNPDEPPKISTGTETFATSGLVAARRSMLAEDCREKSDSSQGEVQKLIGRFPGSFKETSESSMLPDQKFSNHSIAGSHDKERSSTKDPIVVGYGSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRARLDKAKVRKIQADGKQVSTNSLFVSGR | 707 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9416222 | 9422890 | - | MELO3C019411.2.1 | Cme06g01197 | 330346 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g01197 | 707 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 689 | - | - | |
Cme06g01197 | 707 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
Cme06g01197 | 707 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 213 | - | - | |
Cme06g01197 | 707 | MobiDBLite | consensus disorder prediction | 603 | 636 | - | - | |
Cme06g01197 | 707 | ProSiteProfiles | Protein kinase domain profile. | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme06g01197 | 707 | SUPERFAMILY | Protein kinase-like (PK-like) | 125 | 423 | IPR011009 | - | |
Cme06g01197 | 707 | SMART | serkin_6 | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme06g01197 | 707 | Gene3D | Transferase(Phosphotransferase) domain 1 | 214 | 454 | - | - | |
Cme06g01197 | 707 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 251 | 263 | IPR008271 | GO:0004672|GO:0006468 | |
Cme06g01197 | 707 | PANTHER | CYCLIN-DEPENDENT KINASE | 1 | 689 | - | - | |
Cme06g01197 | 707 | MobiDBLite | consensus disorder prediction | 445 | 566 | - | - | |
Cme06g01197 | 707 | CDD | STKc_CDK9_like | 131 | 415 | - | - | |
Cme06g01197 | 707 | MobiDBLite | consensus disorder prediction | 604 | 621 | - | - | |
Cme06g01197 | 707 | ProSitePatterns | Protein kinases ATP-binding region signature. | 137 | 160 | IPR017441 | GO:0005524 | |
Cme06g01197 | 707 | MobiDBLite | consensus disorder prediction | 445 | 471 | - | - | |
Cme06g01197 | 707 | MobiDBLite | consensus disorder prediction | 35 | 49 | - | - | |
Cme06g01197 | 707 | MobiDBLite | consensus disorder prediction | 480 | 496 | - | - | |
Cme06g01197 | 707 | Pfam | Protein kinase domain | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cme06g01197 | 707 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme05g00041 | Cme-Chr5:296340 | Cme06g01197 | Cme-Chr6:9416222 | 7.61E-121 | dispersed | |
Cme06g01197 | Cme-Chr6:9416222 | Cme11g01212 | Cme-Chr11:18344453 | 0 | dispersed | |
Cme09g00238 | Cme-Chr9:1806211 | Cme06g01197 | Cme-Chr6:9416222 | 0 | dispersed | |
Cme06g01197 | Cme-Chr6:9416222 | Cme05g01749 | Cme-Chr5:26533664 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64958 | PF00069 | Pkinase | 9.40E-69 | CL0016 | Cme | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g01197 | - | - | csv:101222182 | 1417.14 |