Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01212 ATGGAGAGCCAGTTTTTTACCATTTTCCAACGAAACCCATGTTTGGATCAAAGGTTTATAGTCTTTGCTTTGATCTTCCTCTCTCTCACTTGCTCCTTCTCACCTTCCTATGGATATGACTCATTGGACCCTTATGCTAACATTACAATCACTTGGGATTTTTTGGTAGAGAATGGGGATACTTATGATGTGAGGGTTTCATTGTACAATTTCCAACTGTTTCGCCATGTGGAGCTGCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGAGGAGGTTATATGGGGTATGTGGGGAGCAGAGACTACTCAACAAGGAAATTGCTCCAAATACGTAGGCAGAGAGCTTCCTCATTGTTGTGAGAAGAAGCCGGAAATTGTTGATCTCATGCCTGGAGCTCCTTATAAGTTGCAAGTGGCCAATTGCTGTAAAGCAGGTGTTCTATCTTCCATGAGACAAGAGCCTTCCAATTATGGAGCTGCCTTCCAAATGAATGTTGGGAAGTCTTCTGGAAAGGATGTAGATAGCAAAATGCCAGCAAATTTCACACTGGGGCTTCCTGGATATACTTGTAGCGAACCATTTCAAGTCCCTCCAACCAAGTTCAGTAAGGATGGTGGTCGCCGGTGGATGCAAGTTCTAGAAACATGGAATGTGACCTGTGTTTACTCTCAATTTCGATCATCACCGACACCTGGGTGCTGCGTTTCATTGTCATCCTTCTACAACAGCACCATTGTCCCTTGCCCTCAGTGCAGCTGCGGTTGCCAAGGGCTAAAGGGAACAAAATGTGTCAAGTTAGGTGAAGCTCCTTCAGTGTTGCAACTTCCACATGAACATAACACTGCTGAAGTAGAACCATTGGTGAGGTGTTCACAGCACATGTGCCCAATAAGGGTACATTGGCATGTGAAACAGAGTTATACACTGTATTGGAGGGCAAAGATAACAATCACAAATCTAAATTTTGCTAAGAATTACTCTGATTGGAACTTAGTAGTGATGCATCCCAATTTGCGGAATATTACTCAAGTTTTCAGCTTCAACTACAGCCCCCTAAATCAGTATGATGACACAGGGATGTTTTGGGGGATACACTTCTACAATGACTTGTTACTCACATCAGGAGAGAGAGGGAATGTCCAAACAGAAATTCTTCTCCAAAAAGATTCAGAAATTTTCACTTTCAGAGAAGGATGGGCATTTCCAAGAAGAATTTTGTTCAATGGGGATGAGTGTGTAATGCCACCTCCAGACCAATATCCAAGGCTCCCAAATAAAGCTCACAGGGCCATGACAGCCCCATTCATAGTTTTCTTCTTCTTGTTTCTCTCTCTATCATTATAA 1347 43.13 MESQFFTIFQRNPCLDQRFIVFALIFLSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWGMWGAETTQQGNCSKYVGRELPHCCEKKPEIVDLMPGAPYKLQVANCCKAGVLSSMRQEPSNYGAAFQMNVGKSSGKDVDSKMPANFTLGLPGYTCSEPFQVPPTKFSKDGGRRWMQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYNSTIVPCPQCSCGCQGLKGTKCVKLGEAPSVLQLPHEHNTAEVEPLVRCSQHMCPIRVHWHVKQSYTLYWRAKITITNLNFAKNYSDWNLVVMHPNLRNITQVFSFNYSPLNQYDDTGMFWGIHFYNDLLLTSGERGNVQTEILLQKDSEIFTFREGWAFPRRILFNGDECVMPPPDQYPRLPNKAHRAMTAPFIVFFFLFLSLSL 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9738731 9742905 + MELO3C019428.2.1 Cme06g01212 330361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01212 448 PIRSF COBRA 13 448 IPR006918 GO:0010215|GO:0031225
Cme06g01212 448 PANTHER PROTEIN COBRA 27 443 IPR006918 GO:0010215|GO:0031225
Cme06g01212 448 Pfam COBRA-like protein 62 224 IPR006918 GO:0010215|GO:0031225
Cme06g01212 448 PANTHER COBRA-LIKE PROTEIN 6 27 443 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01212 Cme-Chr6:9738731 Cme07g01006 Cme-Chr7:11262888 2.19E-151 dispersed
Cme06g01212 Cme-Chr6:9738731 Cme02g01812 Cme-Chr2:24896065 2.80E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01212 - - cmo:103496092 928.702