Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g01249 | ATGGAGATGAATCTCCCTAACGGGGTAGGAGCGGCCGAGAAAAATGGGGAAGAGAAGAAGAAGGAAGACCAGAAGCAAGGAAGCGAAGATCATGACAACGACAGCGATAGTGATAGCGACATGCCGTCGTCCTTGAGCCTTAGAGAGCTTTCCAAGGTTATACTTCCACCTTTGGGAGTTTCAAGCTTTACTGATGGCAGTAAAGTTAAGTCTAATAGATGGATCATCTCTCCCATGAGCTCAAGATACAGGTGGTGGCAGTCGTTCATGGTTGTTTTGGTTGCTTACTCGGTGTGGGTCTACCCATTGGAAGTGGCGTTTCTGGACGCAATTCCTAGGCGAAAATTATTAATTGTTGATAGTATTGTCGATATCTTCTTCGCCATTGATATTGTCTTCACCTTCTTCGTTGCTTACATTGATCATCGCACTCAGCTTCTCGTTCGTGATTCTAAGAAGATAGCTATCAGGTACTTGTCAACATGGTTCTTGATGGATTTGGCATCAACAATCCCATTTGATACACTGGCCTATCTTTCCACAGGCAAATATGATCTTTGTCTCCCTTTTGCCCTCCTAGGATTGCTAAGATTTTGGCGATTGCGACGGGTCAAGCAATTTTTTACCAGGCTTGAGAAGGACATTAGATTCAGCTACTTTTGGGTTAGATGTGCTAGGCTCCTATCTGTCACTTTATTTTATGTCCACTGTGCCGGATGCGTCTACTACTTATTGGCTGACCGATATCCACATCAAGGGAAAACCTGGATTGGAACCTTATTTCCAAATTTCAAAGAGATTAGCTTTGGAGTGAGATATACTTCAGCCATGTATTGGTCTATCACCACAATGACAACTGTTGGTTATGGTGATCTTCATGCTGTGAACACCGTAGAGATGATCTTTATCATTTTCTACATGCTCTTCAATCTCGGGCTTACTGCTTACTTGATAGGTAACATGACAAACTTAGTTGTTGAAGGAACTCGCCGCACTATGGAATTTAGAAACAGCATTGAAATGGCATCAAACTTTGTTAACCGAAATCGCCTGCCTTCGAGGTTGAAGGAACACATATTGGCATACATGTGCTTGAGATTCAAGGCTGAGAGCCTAAACCAACAGCATCTGATTGAACAGCTTCCAAAGTCAATTTGCAAAAGCATATGTCAGCAATTGTTTTTGCCGACCGTGGAGAAAGTCTACCTCTTCAAGGGTGTTTCAAAGGAAACACTTGTGGTGCTGGTAGCGAAGATGAAAGCCGAGTATATACCGCCTAAGGAGGACGTGATAATACAAAATGACACTCCTGATGAAGTTTATATCATTGTGTCTGGGGAAATTGAAATTATTGACTGTGAGATGGATGTGGAACGGATTGTTGGGGCGCTACACTGTGGCAGTATGTTTGGGGAAGTAGGAGCACTTTGTTGCAAAAACCAAAATTTTACATACAGAACCAGAACTCTTTCACAGCTCTTGAAGCTGAAAACAAGTGTATTACAGGAAGCTATGAATTTCAAACAAGAAGACAGTATGGTCATTGTCAAGAACTTCCTTCAGGAGCGTGAGCTCAGCCACAAAATCACCATAGAAGGATCACCGGAAAAAGAGGTGCCGACGCTGATTGAAGAAAAGGATCAAAGTTTCAACTGGAAACACTCCATTGAATTAGATTTTGCTAGAGTGAACATATACAAAGGCCATCCAGTAGCCAGAAAACAGGCTTCTTGTGATGATCCTGGAAAGCTTATCAGGTTGCCACATTCAATGGAGGAGCTCAAAAAACTTGCAGGTGAAAAGTTTGGATTTGATGCTAGAAATGCTGTTTTGACAAATGAAGAAGGCTCTGAAATTGATTCTATTGATGTGATAAGGGATAATGATAAGATTTATTTTTCATAG | 1905 | 41.84 | MEMNLPNGVGAAEKNGEEKKKEDQKQGSEDHDNDSDSDSDMPSSLSLRELSKVILPPLGVSSFTDGSKVKSNRWIISPMSSRYRWWQSFMVVLVAYSVWVYPLEVAFLDAIPRRKLLIVDSIVDIFFAIDIVFTFFVAYIDHRTQLLVRDSKKIAIRYLSTWFLMDLASTIPFDTLAYLSTGKYDLCLPFALLGLLRFWRLRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFYVHCAGCVYYLLADRYPHQGKTWIGTLFPNFKEISFGVRYTSAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEMASNFVNRNRLPSRLKEHILAYMCLRFKAESLNQQHLIEQLPKSICKSICQQLFLPTVEKVYLFKGVSKETLVVLVAKMKAEYIPPKEDVIIQNDTPDEVYIIVSGEIEIIDCEMDVERIVGALHCGSMFGEVGALCCKNQNFTYRTRTLSQLLKLKTSVLQEAMNFKQEDSMVIVKNFLQERELSHKITIEGSPEKEVPTLIEEKDQSFNWKHSIELDFARVNIYKGHPVARKQASCDDPGKLIRLPHSMEELKKLAGEKFGFDARNAVLTNEEGSEIDSIDVIRDNDKIYFS | 634 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 10104936 | 10113912 | - | MELO3C019454.2.1 | Cme06g01249 | 330398 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g01249 | 634 | MobiDBLite | consensus disorder prediction | 13 | 32 | - | - | |
Cme06g01249 | 634 | ProSiteProfiles | KHA domain profile. | 562 | 634 | IPR021789 | - | |
Cme06g01249 | 634 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 403 | 522 | IPR000595 | - | |
Cme06g01249 | 634 | Pfam | KHA, dimerisation domain of potassium ion channel | 562 | 633 | IPR021789 | - | |
Cme06g01249 | 634 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Cme06g01249 | 634 | Gene3D | Jelly Rolls | 370 | 539 | IPR014710 | - | |
Cme06g01249 | 634 | SUPERFAMILY | cAMP-binding domain-like | 330 | 520 | IPR018490 | - | |
Cme06g01249 | 634 | Pfam | Ion transport protein | 83 | 332 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Cme06g01249 | 634 | PRINTS | EAG/ELK/ERG potassium channel family signature | 120 | 130 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme06g01249 | 634 | PRINTS | EAG/ELK/ERG potassium channel family signature | 131 | 140 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme06g01249 | 634 | PRINTS | EAG/ELK/ERG potassium channel family signature | 273 | 290 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme06g01249 | 634 | PRINTS | EAG/ELK/ERG potassium channel family signature | 299 | 310 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme06g01249 | 634 | PRINTS | EAG/ELK/ERG potassium channel family signature | 317 | 326 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Cme06g01249 | 634 | SUPERFAMILY | Voltage-gated potassium channels | 78 | 326 | - | - | |
Cme06g01249 | 634 | Pfam | Cyclic nucleotide-binding domain | 424 | 505 | IPR000595 | - | |
Cme06g01249 | 634 | PANTHER | POTASSIUM CHANNEL AKT1 | 557 | 633 | IPR045319 | GO:0005249|GO:0006813 | |
Cme06g01249 | 634 | PANTHER | POTASSIUM CHANNEL AKT1 | 49 | 528 | IPR045319 | GO:0005249|GO:0006813 | |
Cme06g01249 | 634 | PANTHER | POTASSIUM CHANNEL AKT2/3 | 557 | 633 | - | - | |
Cme06g01249 | 634 | PANTHER | POTASSIUM CHANNEL AKT2/3 | 49 | 528 | - | - | |
Cme06g01249 | 634 | CDD | CAP_ED | 403 | 505 | IPR000595 | - | |
Cme06g01249 | 634 | SMART | cnmp_10 | 403 | 520 | IPR000595 | - | |
Cme06g01249 | 634 | Gene3D | - | 84 | 326 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g00367 | Cme-Chr4:2916235 | Cme06g01249 | Cme-Chr6:10104936 | 3.23E-144 | dispersed | |
Cme06g01249 | Cme-Chr6:10104936 | Cme12g01221 | Cme-Chr12:20340316 | 7.13E-08 | dispersed | |
Cme06g01249 | Cme-Chr6:10104936 | Cme06g01078 | Cme-Chr6:7991880 | 6.10E-17 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g01249 | K21867 | - | csv:101205212 | 1176.39 |