Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01334 ATGAGCATTACCGCGAATCAAAGAGGGTCCCGATCATGGGCCACCGCCGAGGAGTTGCCGGTGTCCAGTGGGGCTCCGATGCCGGCCAAGAAAAAATGGTCAAATGCTATGCCTCTGTTCATCGCTCTCGTCGTCGTAGCAGAGATTATCTTTCTTGGTCGCCTTGATGTCGCTAAAAATGTAGCTATGGTCGATTCATGGGCTGATTTGTTCTATCGTTCGCCGCCTCCCCTTGCACTGATCGACGGAGGCGATGATTTGAATTCCCGGTTCATTGACGGCGACCGGATTTCGGAATTGGGGATTTGTGAGGAGTGGTTGGAGAAAGAAGACGCTGTGACGTATTCTAGGGACTTCCAAAAGGATCCGATTTTGGTTTCTGGGTCTGATGAGGGGAGGAAGTCTTGTGCCGTAGAATGTGAATTTCAGGTCAGTCCAAGTAAGGATCCAGATGCTGCTTTTGGTTTAAATCACCAGGGTGGAATACCCTCAATTATTCGATCCATGGAATCATCTATATATTATGCAGATATCAAGATCGCCCAGGCACGACGGAATGGCTATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTGTTGGATACTTCTCCTGGGCCGAGTACGATATCATGGCTCCAGTTCAGGCAAAGAGTGAGAAAGCCCTTGCAGCTGCTTTCATTTCAAATTGTGGTGCTCGTAACTTCCGCCTGGAAGCTCTTGAGGCTCTTGAAAAGCTGAACATCACAATAGATTCCTATGGTTCTTGTCACAGAAATCGTGATGGAAGCACAGTGAACAAATTGGAGGCTCTAAAGCGCTACAAGTTCAGCTTGGCTTTTGAGAATTCCAACGAGGAAGATTATGTGACAGAAAAATTTTTCCAATCTCTAGTTGCTGGAGCTATTCCAGTGGTTATTGGAGCTCCAAACATTCAAGATTTTGCTCCATCACCTGCTTCACTTTTGCATATCGGGGAACTTTCAGATGTTGAGTCAGTTGCCAACTCTATGAAATACCTTGCAGCAAATCCTGAGGCATTCAACAATTCTCTGAGGTGGAAATATGAGGGTCCATCTGATTCTTTCAAAGCACTATTTGATATGGGAGCAGTTCATTCGTCATGTCGCCTTTGTATTCACGTGGCAACTGGTATTCATGAGACCGAAGAGAAGGGTTTAGCGTTCAAAAATCGACCATGTAAATGCACCAGAGGTTCTGAAACCGTTCATCACTTGTATGTTAGAGAAAGAGGAAGGTTTAATTCTGAGTCCATTTTCTTAAGGTCGAGTAATCTGACGGTTGAAGGGCTGGCCTCAGCAGTGATTTCGAAGTTCAATTCTCTGAAGCACGAACCAATATGGAAGCAGGAGAGGCCTAAAAGCTTAAAAGGAGGGGATGAATTAAGGTTGTACAAAATATATCCAGTTGGGTTGACCCAGAGGCAAGCTTTATATACCTTCAGATTTAAAGGGGACTCTGGTTTCAGAAGATACGTGGAAGATAACCCTTGTGCTAAACTTGAAGCCATTTTTGTATAG 1545 44.98 MSITANQRGSRSWATAEELPVSSGAPMPAKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSWADLFYRSPPPLALIDGGDDLNSRFIDGDRISELGICEEWLEKEDAVTYSRDFQKDPILVSGSDEGRKSCAVECEFQVSPSKDPDAAFGLNHQGGIPSIIRSMESSIYYADIKIAQARRNGYSIVMTTSLSSDVPVGYFSWAEYDIMAPVQAKSEKALAAAFISNCGARNFRLEALEALEKLNITIDSYGSCHRNRDGSTVNKLEALKRYKFSLAFENSNEEDYVTEKFFQSLVAGAIPVVIGAPNIQDFAPSPASLLHIGELSDVESVANSMKYLAANPEAFNNSLRWKYEGPSDSFKALFDMGAVHSSCRLCIHVATGIHETEEKGLAFKNRPCKCTRGSETVHHLYVRERGRFNSESIFLRSSNLTVEGLASAVISKFNSLKHEPIWKQERPKSLKGGDELRLYKIYPVGLTQRQALYTFRFKGDSGFRRYVEDNPCAKLEAIFV 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11263296 11282410 + MELO3C019516.2.1 Cme06g01334 330483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01334 514 MobiDBLite consensus disorder prediction 1 24 - -
Cme06g01334 514 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 31 492 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cme06g01334 514 Gene3D - 167 363 IPR038577 -
Cme06g01334 514 MobiDBLite consensus disorder prediction 1 17 - -
Cme06g01334 514 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 114 385 - -
Cme06g01334 514 PANTHER BNAA06G03030D PROTEIN 31 492 - -
Cme06g01334 514 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 385 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00708 Cme-Chr2:8523222 Cme06g01334 Cme-Chr6:11263296 7.12E-69 transposed
Cme03g01095 Cme-Chr3:20388597 Cme06g01334 Cme-Chr6:11263296 1.11E-14 transposed
Cme11g01568 Cme-Chr11:23202113 Cme06g01334 Cme-Chr6:11263296 1.05E-68 transposed
Cme01g00052 Cme-Chr1:410903 Cme06g01334 Cme-Chr6:11263296 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01334 K00753 - csv:101202837 979.933