Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01370 ATGGCTTCCCTCTCTATTGGGATTCATTTGCCCCCATCTCATCATTGGAAGAGATTTGCACTTCAGTCCCAGTCTCCCATTTCACTCCCCTTTCACACTAGCTATGGTTCTTCGTTGAGTAGAGTCAGAACTCCAAGGTTGCTTGGTAAGAACCTTCTTGTGCGGGCTGAAGATGAGAATAAAAGCTCTTCTTCGTTTGAGCAACTGCAAGCTCCACCCAGCTTCAGTAAACAACTGGAGGAACTCTCATCCAAGTCAGGAACATGTGATCCCCTATGCTCAGTTGATGAAGTAAGTTCACAGGATTTTGAAGATAGTTACCAGCCAAAGACTGATTTAGTAAAGGCTTTTGCAATATTTGCAGCTGCCCTTACTGGAACAGTGGCAATTAATCACTCCTGGGTTGCTGCTAATCAGGATCTTGCTATGGTGTTGTTGTTTAGTATAGGATATGCTGGAATCATTTTTGAAGAATCTCTTGCCTTCAACAAGAGTGGAGTGGGATTATTGATGGCTGTTGGGTTATGGGTTATTCGAAGTATTGGGGCTCCATCCACCGAAATTGCTGCTTCAGAGCTAACACATGCCACAGCAGAAGTCAGTGAAATTGTATTTTTCTTACTCGGCGCAATGACCATAGTGGAGATCATTGATGCCCATCAAGGATTTAAGTTGGTTACAGACAGTATAACCACTCGAAAACCACGAACTCTCCTCTGGGTGTCGTGTCAGGGCTGTGTCTCGACATGTCAGTTGGCGTGTCGGCTGCATTTCAATCCTCGACAACCTGACGACCACAATTATCATGGTTTCTCTATTGCGAAAACTAGTTCCGCCATCAGAGTATCGCAAGTACGGAGAAACCCAAATAAAACAAGAAGCCGCTGCCACCAAGGACGCCATCAGTACCGTTGTTGCCACCATGGAAAAATTGCTCCAACAACTTCAAAAGCCACCGACGGTCACAATGGGACAACCCTTGTCGTCGTTCGCGCAGCCCTTCGACCAGAATTAACCTCACGCGCCGCCTCTGTCAAGGTGTGGGCCCATGTGCGCTATCCGTTCGTCTCAACGCTCAACCCAATCTCTTCTATGCTCAGTCGACTATCCAACTGTCTCACCCTTTTAGTCGGCCATAGCACCACACATTGCCCATGCCCTCCGGTTACGGACAACCGCCACCAAAATTATACAGATCCTTTACAGCAACCATATTTTTGTGGTCCCAGGATTAACCAAATCCATAGCAAATATGGTTTTGAAGTTGGTGAATCCTCGACACAGTTTAAATCGACCGATCTACCAATGCTACTTGGAGCTGTAATCGTCATAGCAGCAAATGCGGGTGGTGCGTGGACACCTATTGGAGATGTAACAACCACCATGCTATGGATACATGGTCAGATAACAACAATGCCAACACTCAAAGACTTGGTTATACCTTCTGCTGTATCACTTGCAGTACCGCTGGCCCTGCTGTCCCTTACAAGTGAAGTTAATGGGAAGGGACAGGATTTTTCTGATGTTATGGCGTCTGAGCAGATGGCTCCTCGAGGAAAGCTCGTCTTTTCTGTAGGTGTTGGAGCTTTAGTTTTTGTCCCAGTGTTCAAGGCCCTCACAGGTTTGCCACCCTACATGGGTATGCTGCTTGGTCTTGGAATTCTGTGGATTCTGACTGATGCTATTCACTATGGTGAATCGGAAAGGCAAAGGTTGAAAGTTCCTCAGGCTTTATCTCGTATCGATACGCAGGGAGCGCTATTTTTCCTTGGTATCCTTTTGTCAGTCAGCAGCTTAGAGGCTGCGGGGGTGTTACGTGAGTTAGCAAACTACCTTGATGCTCATATTCCAAATGTTGAACTCATTGCGAGTGCAGTCGGAGTTATATCAGCAATTATAGACAATGTACCATTAGTTGCAGCAACAATGGGAATGTACGACCTCTCGTCCTTCGCTCAAGATTCTGAGTTCTGGCAGCTAATTGCATTTTGTGCTGGCACTGGTGGATCCATGCTTATAATTGGATCTGCAGCTGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTAAGAAAGGTTAGCGGTTTTGCATTTGCGGGATATGCTGCCGGGATTGCTGCCTATTTAGCTCTTCATAACTTCAACATATCTCTACCTACAACTATTGCTGAGGTGCCTTCCATTTTGGGTTCATAA 2208 46.15 MASLSIGIHLPPSHHWKRFALQSQSPISLPFHTSYGSSLSRVRTPRLLGKNLLVRAEDENKSSSSFEQLQAPPSFSKQLEELSSKSGTCDPLCSVDEVSSQDFEDSYQPKTDLVKAFAIFAAALTGTVAINHSWVAANQDLAMVLLFSIGYAGIIFEESLAFNKSGVGLLMAVGLWVIRSIGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIIDAHQGFKLVTDSITTRKPRTLLWVSCQGCVSTCQLACRLHFNPRQPDDHNYHGFSIAKTSSAIRVSQVRRNPNKTRSRCHQGRHQYRCCHHGKIAPTTSKATDGHNGTTLVVVRAALRPELTSRAASVKVWAHVRYPFVSTLNPISSMLSRLSNCLTLLVGHSTTHCPCPPVTDNRHQNYTDPLQQPYFCGPRINQIHSKYGFEVGESSTQFKSTDLPMLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQITTMPTLKDLVIPSAVSLAVPLALLSLTSEVNGKGQDFSDVMASEQMAPRGKLVFSVGVGALVFVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLEAAGVLRELANYLDAHIPNVELIASAVGVISAIIDNVPLVAATMGMYDLSSFAQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNFNISLPTTIAEVPSILGS 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11859836 11871696 + MELO3C019541.2.1 Cme06g01370 330519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01370 735 PANTHER BNAC03G40960D PROTEIN 436 735 - -
Cme06g01370 735 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 436 735 IPR045016 GO:0006814|GO:0015297
Cme06g01370 735 Pfam Citrate transporter 432 666 IPR004680 GO:0016021|GO:0055085
Cme06g01370 735 PANTHER BNAC03G40960D PROTEIN 1 242 - -
Cme06g01370 735 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 242 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01370 Cme-Chr6:11859836 Cme12g00995 Cme-Chr12:17420358 1.24E-07 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01370 - - csv:101221448 518.85