Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme06g01373 ATGATTCACACCAACAAACCATGGCTCTTTCTTGCTCTCTTTTCCTCTTTCACTTTCTTTTTCCCTTCTTTTGCTCTCAACCCCGATGCCACTCTCTTGTTTTCTCTCAAACGCTCCATTCTCGGCGATCCCTTGTCTGTTTTCGCTAATTGGAATGTCTATGATGCTACCCCTTGTTCCTGGCTTGGAGTTACCTGCACCGACCTTCGAGGCTATGGCGGCGGATGGTCAGATTTCCTCAGAGTCACTGCTCTCTCCCTCCCCAACAGCCAGCTTCTGGGTTCCATTCCTGATGAGCTTGGAAGGATCGAACACCTTCGTCTTCTCGATCTCTCTGGTAATTTCTTTAATGGGTCTCTTCCCTTTTCTATTTTTAATGCTTCAGAGCTTCAGGTTCTTTCTCTTTCCAACAATGTTATTTCCGGCGAGTTGCCGATCGACATTGGGGGTTTGAAGAGTCTTCAAGTTTTGAATCTCTCTGATAATGCGTTGGCTGGAAAAGTGCCCCAAAATCTTACTGCTCTGAAGAATCTTACGGTCGTTTCTCTGAGGAGTAATTACTTTACCGGGGAGATTCCGGGGAATTTTAGTTCCGTTGAGGTTTTGGATCTGTCTTCTAATTTGTTTAATGGGTCTCTGCCGGCGGTTTTTGGTGGGGAGAAACTCCGGTATTTGAACTTCTCTTACAATAAAATTTCAAGTTCTGTTCCGTTGGAGTTCGCTAAGAGGATTCCAGTGAATGTGACTATGGATCTTTCTTTCAATAATCTCACTGGAGCGATTCCTCAGTCGATTGCTCTGCTCAACCAGAAAGCAGAGGCGTTCGCCGGAAATGAAGATCTCTGTGGGAAGCCATTGAAGCATCTCTGTTCAATTCCTTCTTCACTCACAACTCCCCCAAATGTTTCTGAAACTTCATCTTCTTCTCCAGCCATCGCCGCCATACCCAAAACAATCGGCTCTGTTCCGGCAACACAGTCCCCAAGAGGTCCAAACGATACACAAACTTCTCAGCCACAAAACACCATGAAACCCATCACAATAGTTGCAATAACCGTCGGAGACCTCGCCGGAATCGCCATTCTCGGCGTAGTGATTCTCTACGTCTACCATTACCGGAAACGTAATACTCTCAATTCCAAAACCGCAAAATCCACCGACAAGAAACGGCCGATTAACTCAGAACAAAACCCTCAAACTAATCAGAAAAAACCTTCATCATCAGTGTTGTTCTGTTTAGCCAACAAAGGAGAAGAGACATCAGAGGCGACGAGTTCTTCCGACGGCGAAGAACAGAGAGAGAAACCCGGAATAAGCCAGGACGGAAAGAACAGAGGCAATAAGAAAAACGGCGTACTAGTGACAGTGGACGGAGAAACAGAGCTGGAATTGGAAACTCTGTTAAAGGCATCGGCATATATACTTGGAGCAAGCGGCGGGAGCATCGTGTACAAGGCGGTGCAGGAGGACGGGACGGCGTTGGCGGTGAGAAGAATCGGTGACGTGAGCGTGGAGAGATTGAGGGACTTTGAGAACCAAGTGAGAGGCATTGCTAAGATTCGACATCCAAATTTGGTGAAAATTCGAGGGTTGTTTTGGGGAGAAGATGAGAAGCTCATCATCTATGATTATGTCTCAAATGGTTGCCTTTCAACTTCCCTTCACAGAAAACCGAGTTCATCGTCTTCTTCCCAGAGCCATCTATCGTTTGAAGTCCGATTAAATATCGCCAGAGGAATAGCCCGAGGACTTGCCTTCATCCACGAGAAGAAGCACGTCCATGGCAACCTCAAGCCTTCCAACATCCTCTTAAACGCCGAAATGGAGCCCTTAATCGCCGACCTCGGCCTCGACAAGCTCCTCTCCGGCAGGTCCAAAATCGCGTTCGCCTCCAGTTCTGCACGGAACTTAGGCAGCCACAGATCCACCCCCAATCGCGAGAACCAAGACGGGAGCGGCGGAAGCCCGTCGGTGAGCCTGGGATCAGCGTACCAGGCGCCGGAGTCGCTGAAGAATGTGAAATCGAGTCCTAAATGGGACGTGTACTCGTTCGGAGTGATTGTAATGGAGCTGGTGAGTGGGAGGATTGGGACGGAGAGAGAATTTGGGAGTGGTGAAGAGGAAGGGAGGATTAAGAAGATGGTGGATTTGGCGATTAGAGAGGAAGTGGAAGGGAAAGAAGAAGCGGTAATGGGGATATTTAGATTAGGGTTTAGTTGTGTTAATTTGGTGCCTCAAAAGAGACCCACCATGAAAGAGGCTCTCCAAGTTCTTGACAAAATTGCTTCTTCTATCACCTAA 2301 47.76 MIHTNKPWLFLALFSSFTFFFPSFALNPDATLLFSLKRSILGDPLSVFANWNVYDATPCSWLGVTCTDLRGYGGGWSDFLRVTALSLPNSQLLGSIPDELGRIEHLRLLDLSGNFFNGSLPFSIFNASELQVLSLSNNVISGELPIDIGGLKSLQVLNLSDNALAGKVPQNLTALKNLTVVSLRSNYFTGEIPGNFSSVEVLDLSSNLFNGSLPAVFGGEKLRYLNFSYNKISSSVPLEFAKRIPVNVTMDLSFNNLTGAIPQSIALLNQKAEAFAGNEDLCGKPLKHLCSIPSSLTTPPNVSETSSSSPAIAAIPKTIGSVPATQSPRGPNDTQTSQPQNTMKPITIVAITVGDLAGIAILGVVILYVYHYRKRNTLNSKTAKSTDKKRPINSEQNPQTNQKKPSSSVLFCLANKGEETSEATSSSDGEEQREKPGISQDGKNRGNKKNGVLVTVDGETELELETLLKASAYILGASGGSIVYKAVQEDGTALAVRRIGDVSVERLRDFENQVRGIAKIRHPNLVKIRGLFWGEDEKLIIYDYVSNGCLSTSLHRKPSSSSSSQSHLSFEVRLNIARGIARGLAFIHEKKHVHGNLKPSNILLNAEMEPLIADLGLDKLLSGRSKIAFASSSARNLGSHRSTPNRENQDGSGGSPSVSLGSAYQAPESLKNVKSSPKWDVYSFGVIVMELVSGRIGTEREFGSGEEEGRIKKMVDLAIREEVEGKEEAVMGIFRLGFSCVNLVPQKRPTMKEALQVLDKIASSIT 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11927218 11931859 - MELO3C019544.2.1 Cme06g01373 330522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme06g01373 766 MobiDBLite consensus disorder prediction 426 442 - -
Cme06g01373 766 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
Cme06g01373 766 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Cme06g01373 766 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 21 763 - -
Cme06g01373 766 Gene3D Phosphorylase Kinase; domain 1 439 544 - -
Cme06g01373 766 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Cme06g01373 766 SUPERFAMILY L domain-like 28 288 - -
Cme06g01373 766 MobiDBLite consensus disorder prediction 392 409 - -
Cme06g01373 766 MobiDBLite consensus disorder prediction 321 341 - -
Cme06g01373 766 PANTHER OS04G0122200 PROTEIN 21 763 - -
Cme06g01373 766 MobiDBLite consensus disorder prediction 381 451 - -
Cme06g01373 766 SUPERFAMILY Protein kinase-like (PK-like) 474 758 IPR011009 -
Cme06g01373 766 ProSiteProfiles Protein kinase domain profile. 469 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g01373 766 MobiDBLite consensus disorder prediction 633 661 - -
Cme06g01373 766 Gene3D Ribonuclease Inhibitor 195 292 IPR032675 -
Cme06g01373 766 Gene3D Ribonuclease Inhibitor 26 194 IPR032675 -
Cme06g01373 766 Pfam Protein kinase domain 475 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme06g01373 766 Gene3D Transferase(Phosphotransferase) domain 1 545 765 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g01373 Cme-Chr6:11927218 Cme11g00706 Cme-Chr11:8397833 0 dispersed
Cme06g01373 Cme-Chr6:11927218 Cme10g00230 Cme-Chr10:1531870 4.73E-139 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64961 PF00069 Pkinase 6.60E-30 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme06g01373 - - csv:101203801 1337.01