Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g01378 | ATGGGCAGCATTGAATCTGAAAGAACTGTTACAGGTTTCGCCGCCAAAGACCCATCTGGGATTCTCTCTCCTTATACTTACACTCTCAGAAACACCGGTCCACAAGATGTTTTCATCAAAGTCATTTGCTGTGGAATCTGCCACTCTGATCTCCACCAAGTCAAGAACGAGCTCGGCATGTCCAATTACCCCATGGTTCCTGGACACGAAGTCGTCGGAGAAGTGGTGGAGCTTGGATCGGAAGTGGATCGTTTCAGAATTGGGGAATTGGTTGGAGTTGGGTGTATTCTTGGATCTTGTTCCACTTGTAGTCCTTGTAACTCCGACAAGGAGCAGTACTGTCATAAGAGAATCTGGACTTATAATGATGTGTATCACGATGGCCGTCCCACCCAAGGCGGTTTCTCCTCCGCCATGGTCGTCCACCAGAAGTTTGTTGTAAGAATCCCAGAAGGGATGTCACCGGAGCAGGCGGCGCCGCTGCTGTGCGCGGGAGTGACGGTGTACAGTCCATTGAGTCACTTTGGACTGAAACAGAGTGGGCTAAGAGGCGGAATTTTGGGACTGGGCGGCGTTGGACATATGGGTGTGAAAGTGGCAAAGGCTTTGGGCCATCACGTGACGGTGATAAGCTCGTCGGAGAAGAAAAGAGAGGAGGCTCTGGAACATCTTGGTGCCGACGATTACTTGGTCAGCTCCGACAAGGCTCAAATGGACCGAGCCATTGACTCACTCGATTACATTATCGACACCGTCCCTGTTTTTCATCCGCTCGAGCCATATCTCTCACTGCTAAAACTCGACGGAAAATTGATCTTGATGGGTGTCATTAATACTCCATTACAATTTGTTTCCCCTCTCCTTATGATCGGGAGGAAGACGATTACAGGGAGCTTCATCGGAAGTATGAGAGAGACGCAAGAAGTATTGGATTTCTTTAAAGAGAAGGAACTGACCTCAATGATTGAAGTGATAAAGGTTGATTATATAAACAAGGCTTTCGAGAGGTTGGAGAAGAACGATGTTAGATACAGGTTCGTGGTGGACGTTGCTGGTAGTAAGATGCCTGAGTGA | 1074 | 48.32 | MGSIESERTVTGFAAKDPSGILSPYTYTLRNTGPQDVFIKVICCGICHSDLHQVKNELGMSNYPMVPGHEVVGEVVELGSEVDRFRIGELVGVGCILGSCSTCSPCNSDKEQYCHKRIWTYNDVYHDGRPTQGGFSSAMVVHQKFVVRIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKREEALEHLGADDYLVSSDKAQMDRAIDSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVSPLLMIGRKTITGSFIGSMRETQEVLDFFKEKELTSMIEVIKVDYINKAFERLEKNDVRYRFVVDVAGSKMPE | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 12016238 | 12018204 | - | MELO3C019548.2.1 | Cme06g01378 | 330527 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g01378 | 357 | CDD | CAD1 | 11 | 349 | - | - | |
Cme06g01378 | 357 | Pfam | Zinc-binding dehydrogenase | 191 | 314 | IPR013149 | - | |
Cme06g01378 | 357 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270|GO:0016491 | |
Cme06g01378 | 357 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 153 | 318 | IPR036291 | - | |
Cme06g01378 | 357 | PANTHER | ALDEHYDE REDUCTASE | 5 | 355 | - | - | |
Cme06g01378 | 357 | SUPERFAMILY | GroES-like | 17 | 181 | IPR011032 | - | |
Cme06g01378 | 357 | Gene3D | - | 13 | 350 | - | - | |
Cme06g01378 | 357 | SMART | PKS_ER_names_mod | 20 | 348 | IPR020843 | GO:0016491 | |
Cme06g01378 | 357 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED | 5 | 355 | - | - | |
Cme06g01378 | 357 | Pfam | Alcohol dehydrogenase GroES-like domain | 35 | 148 | IPR013154 | - | |
Cme06g01378 | 357 | Gene3D | - | 164 | 320 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g01378 | Cme-Chr6:12016238 | Cme11g00083 | Cme-Chr11:693602 | 7.44E-115 | dispersed | |
Cme04g00447 | Cme-Chr4:3546623 | Cme06g01378 | Cme-Chr6:12016238 | 1.79E-91 | transposed | |
Cme08g00714 | Cme-Chr8:4754121 | Cme06g01378 | Cme-Chr6:12016238 | 2.61E-126 | transposed | |
Cme09g01902 | Cme-Chr9:23162589 | Cme06g01378 | Cme-Chr6:12016238 | 2.41E-100 | transposed | |
Cme01g00092 | Cme-Chr1:632059 | Cme06g01378 | Cme-Chr6:12016238 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g01378 | K00083 | - | csv:101222395 | 688.723 |