Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme06g01482 | ATGGCAACCAAGATCGACGGAATTGAAGACGAAGAAATTTCAAAGCTCGAAGAAGGCACTGTCGTTTCCGCCATTGCTCGCCTCTGTCCCTCCAATTCAGTCGTCATCATCCAAAAGGTAATCGCGGAATTGATCGGGACGTACTTCGTGATCTTCAGCGGATGTGGGGCGGTGGCGGTGAACAAAATATACGGATCAGTGACATTTCCGGGAATCTGTGTGGTTTGGGGATTGATTGTAATGGTAATGGTGTATTCGGTGGGACATGTCTCTGGAGCGCATTTCAACCCTGCTGTTACTTTCACCTTCGCCCTTTTTCGTCGTTTCCCCTTCTGGCAGGTGCCAATATACACAGGAGCTCAACTAATGGGGTCCCTTCTCGCAAGCTGCACATTGGATCTAATGCTTGAAGTGACCCCAGAAGCCTTCTTTGGAACAGTGCCCGTTGGATCCAATGTTCAATCTTTGGTTCTTGAAATTATCATCACATTTCTTTTGATGTTTGTCATCTCTGGTGTCTCCACCGATAATAGAGCCGTAGGAGAATTGGGTGGAATTGTGGTTGGAATGACCATTCTCTTGAATGTTTTCGTCGCCGGGCCGATTTCTGGAGCTTCTATGAATCCGGCAAGGACTATTGGACCAGCCATAGTGAAACGGCAGTTTAAAGGACTATGGGTTTACATAGTAGGACCCTTTATCGGAGCGGTCGCCGGTGGATTTGTCTATAACCTAATGAGATACACAGACAAGCCGCTGCGGGAGATCACCAGAAGCACTTCATTCCTCACCGGCACCCTGAAATCATAA | 810 | 47.78 | MATKIDGIEDEEISKLEEGTVVSAIARLCPSNSVVIIQKVIAELIGTYFVIFSGCGAVAVNKIYGSVTFPGICVVWGLIVMVMVYSVGHVSGAHFNPAVTFTFALFRRFPFWQVPIYTGAQLMGSLLASCTLDLMLEVTPEAFFGTVPVGSNVQSLVLEIIITFLLMFVISGVSTDNRAVGELGGIVVGMTILLNVFVAGPISGASMNPARTIGPAIVKRQFKGLWVYIVGPFIGAVAGGFVYNLMRYTDKPLREITRSTSFLTGTLKS | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 14138665 | 14142333 | - | MELO3C020281.2.1 | Cme06g01482 | 330631 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme06g01482 | 269 | ProSitePatterns | MIP family signature. | 94 | 102 | IPR022357 | - | |
Cme06g01482 | 269 | TIGRFAM | MIP: MIP family channel proteins | 42 | 243 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme06g01482 | 269 | CDD | MIP | 38 | 246 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme06g01482 | 269 | Gene3D | Glycerol uptake facilitator protein. | 6 | 256 | IPR023271 | - | |
Cme06g01482 | 269 | PANTHER | AQUAPORIN NIP4-1-RELATED | 25 | 257 | - | - | |
Cme06g01482 | 269 | Pfam | Major intrinsic protein | 33 | 243 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme06g01482 | 269 | PANTHER | AQUAPORIN NIP2-1 | 25 | 257 | IPR034294 | - | |
Cme06g01482 | 269 | SUPERFAMILY | Aquaporin-like | 36 | 256 | IPR023271 | - | |
Cme06g01482 | 269 | PRINTS | Major intrinsic protein family signature | 38 | 57 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme06g01482 | 269 | PRINTS | Major intrinsic protein family signature | 76 | 100 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme06g01482 | 269 | PRINTS | Major intrinsic protein family signature | 113 | 132 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme06g01482 | 269 | PRINTS | Major intrinsic protein family signature | 158 | 176 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme06g01482 | 269 | PRINTS | Major intrinsic protein family signature | 189 | 211 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme06g01482 | 269 | PRINTS | Major intrinsic protein family signature | 226 | 246 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme02g00721 | Cme-Chr2:8672157 | Cme06g01482 | Cme-Chr6:14138665 | 9.95E-51 | dispersed | |
Cme06g00639 | Cme-Chr6:4121946 | Cme06g01482 | Cme-Chr6:14138665 | 9.89E-47 | dispersed | |
Cme06g01482 | Cme-Chr6:14138665 | Cme08g00198 | Cme-Chr8:1344229 | 1.53E-105 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme06g01482 | K09874 | - | csv:101215315 | 500.36 |